RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 PDSS1Q5T2R2 415 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 USP50Q70EL3 339 aaPredicted RBP9.15□□□□□ -0.94
VCAN-208ENST00000512590 CAND1Q86VP6 1230 aaKnown RBP9.15□□□□□ -0.94
VCAN-208ENST00000512590 IL22RA1Q8N6P7 574 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 TDRD5Q8NAT2 981 aaKnown RBP9.15□□□□□ -0.94
VCAN-208ENST00000512590 AGBL3Q8NEM8 1001 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 C3orf14Q9HBI5 128 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 NECTIN3Q9NQS3 549 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 SEPT3Q9UH03 358 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 MAP3K1Q13233 1512 aa9.15□□□□□ -0.94
VCAN-208ENST00000512590 CC2D2AQ9P2K1 1620 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 E2F8A0AVK6 867 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 ATG13O75143 517 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 LARGE1O95461 756 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 GPD1P21695 349 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 CYP2F1P24903 491 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 SERPINA4P29622 427 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 SOX10P56693 466 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 KDSRQ06136 332 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 ECH1Q13011 328 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 TLK2Q86UE8 772 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 MDM1Q8TC05 714 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 FMO2Q99518 471 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 SYT15Q9BQS2 421 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 PHF20Q9BVI0 1012 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 ZDHHC4Q9NPG8 344 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 ARHGAP28Q9P2N2 729 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 H0YGN5 161 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 TSPAN9O75954 239 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 VTNP04004 478 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 HOXC6P09630 235 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 CCNYL3P0C7X3 344 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 PTGER2P43116 358 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.15□□□□□ -0.95
VCAN-208ENST00000512590 LRP8Q14114 963 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 TRPC4APQ8TEL6 797 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 EXOC2Q96KP1 924 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 SH3GL2Q99962 352 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 CHID1Q9BWS9 393 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 PITPNM3Q9BZ71 974 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 PRDM16Q9HAZ2 1276 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 COPS7AQ9UBW8 275 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 TRPV2Q9Y5S1 764 aa9.15□□□□□ -0.95
VCAN-208ENST00000512590 SF3B1O75533 1304 aaKnown RBP eCLIP9.14□□□□□ -0.95
VCAN-208ENST00000512590 OR7A10O76100 309 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 ITGB3P05106 788 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 SPRP35270 261 aaPredicted RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 GPR15P49685 360 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 PRKAG1P54619 331 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 TBX4P57082 545 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 SCRN3Q0VDG4 424 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 SLC29A2Q14542 456 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 MINDY4Q4G0A6 757 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 MDH1BQ5I0G3 518 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 DDI2Q5TDH0 399 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 LGI2Q8N0V4 545 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 BSNDQ8WZ55 320 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 OVCA2Q8WZ82 227 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 HERVK_113Q902F9 699 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 ATOH1Q92858 354 aaPredicted RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 PPP1R14BQ96C90 147 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 TRNT1Q96Q11 434 aaKnown RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 VIPAS39Q9H9C1 493 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 POLD4Q9HCU8 107 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 SIRPGQ9P1W8 387 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 GHRLQ9UBU3 117 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 TRIM66O15016 1216 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 TCEA3O75764 348 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 FGGP02679 453 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 CDH3P22223 829 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 BMPR2Q13873 1038 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 C4orf46Q504U0 113 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 C20orf194Q5TEA3 1177 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 C16orf46Q6P387 395 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 MTDHQ86UE4 582 aaKnown RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 HPS6Q86YV9 775 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 ZNF611Q8N823 705 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 FAM13CQ8NE31 585 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 OR52L1Q8NGH7 329 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 ZFP28Q8NHY6 868 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 PDGFDQ9GZP0 370 aaPredicted RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 MIF4GDA9UHW6 222 aaKnown RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 FAM227AF5H4B4 570 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 APRTP07741 180 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 LTKP29376 864 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 APLP1P51693 650 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 NFIXQ14938 502 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 PFKFB3Q16875 520 aaPredicted RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 FAM83EQ2M2I3 478 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 FIP1L1Q6UN15 594 aaKnown RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 ATG14Q6ZNE5 492 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 CD302Q8IX05 232 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 LMAN2LQ9H0V9 348 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 TUT1Q9H6E5 874 aaKnown RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 MOCS1Q9NZB8 636 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 AAR2Q9Y312 384 aaKnown RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 WFS1O76024 890 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 SLC35G4P0C7Q5 338 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 DRD4P21917 467 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 ADD2P35612 726 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms