RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 PPP1R14AQ96A00 147 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 RSAD1Q9HA92 442 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 SETD4Q9NVD3 440 aa11.14□□□□□ -0.63
CPNE4-209ENST00000512055 CPSF3Q9UKF6 684 aaKnown RBP11.14□□□□□ -0.63
CPNE4-209ENST00000512055 PSMA3P25788 255 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 CSTF3Q12996 717 aaKnown RBP11.13□□□□□ -0.63
CPNE4-209ENST00000512055 RUNDC3AQ59EK9 446 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 DGKKQ5KSL6 1271 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 C16orf89Q6UX73 402 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 EPS8L2Q9H6S3 715 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF180Q9UJW8 692 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 TELO2Q9Y4R8 837 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 RAD51BO15315 384 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 ATP9BO43861 1147 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 PEX1O43933 1283 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 DGKIO75912 1065 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 ABCB1P08183 1280 aaPredicted RBP11.13□□□□□ -0.63
CPNE4-209ENST00000512055 TUBA3CQ13748 450 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 EIF2S3LQ2VIR3 472 aaKnown RBP11.13□□□□□ -0.63
CPNE4-209ENST00000512055 TXNDC11Q6PKC3 985 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 KDELC2Q7Z4H8 507 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 REPS2Q8NFH8 660 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 ARHGEF37A1IGU5 675 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 RARGP13631 454 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 SUZ12Q15022 739 aaKnown RBP11.13□□□□□ -0.63
CPNE4-209ENST00000512055 TFDP3Q5H9I0 405 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 PGBD4Q96DM1 585 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 KLHL32Q96NJ5 620 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 OSMRQ99650 979 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 PCDHA3Q9Y5H8 950 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 DOT1LQ8TEK3 1739 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 SRP72O76094 671 aaKnown RBP11.13□□□□□ -0.63
CPNE4-209ENST00000512055 GJB1P08034 283 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 PTPN11Q06124 597 aaPredicted RBP11.13□□□□□ -0.63
CPNE4-209ENST00000512055 SCRN3Q0VDG4 424 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 USP39Q53GS9 565 aaKnown RBP11.13□□□□□ -0.63
CPNE4-209ENST00000512055 MFSD14CQ5VZR4 134 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 FOXR2Q6PJQ5 311 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 TMC3Q7Z5M5 1100 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 TSSK1BQ9BXA7 367 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 LAMB4A4D0S4 1761 aa11.13□□□□□ -0.63
CPNE4-209ENST00000512055 UBXN8O00124 270 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 PLA2G6O60733 806 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 RASSF6Q6ZTQ3 369 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 FAM71AQ8IYT1 594 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 FAM162AQ96A26 154 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CMTM5Q96DZ9 223 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 ROPN1BQ9BZX4 212 aaPredicted RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 ROPN1Q9HAT0 212 aaPredicted RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 ENTPD7Q9NQZ7 604 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 BTBD3Q9Y2F9 522 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 FAM47DPA6NHR8 397 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 TRIM64CA6NLI5 447 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 RPS6KA5O75582 802 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CD4P01730 458 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 ABCE1P61221 599 aaKnown RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SIAH1Q8IUQ4 282 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 BRSK2Q8IWQ3 736 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 MYCBPAPQ8TBZ2 947 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SEMA4DQ92854 862 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 LENG9Q96B70 501 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CDCA5Q96FF9 252 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CHST7Q9NS84 486 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CCDC59Q9P031 241 aaKnown RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CPA4Q9UI42 421 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SMCO3A2RU48 225 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 TRIM49D1C9J1S8 452 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CXCL11O14625 94 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 KRT36O76013 467 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 TYK2P29597 1187 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 TNFSF9P41273 254 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 MAPK10P53779 464 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 OCLNQ16625 522 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 ZNF284Q2VY69 593 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 TREML2Q5T2D2 321 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SHQ1Q6PI26 577 aaKnown RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SPOCD1Q6ZMY3 1216 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 KIAA0408Q6ZU52 694 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CLVS1Q8IUQ0 354 aaPredicted RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 OR5B17Q8NGF7 314 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 EXD1Q8NHP7 514 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 INPP4AQ96PE3 977 aaPredicted RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SARS2Q9NP81 518 aaKnown RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 BFARQ9NZS9 450 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 PSMC3IPQ9P2W1 217 aaPredicted RBP11.12□□□□□ -0.63
CPNE4-209ENST00000512055 PDHXO00330 501 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CES2O00748 559 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 GNB5O14775 395 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 ITGA3P26006 1051 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 PSMB9P28065 219 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 MAGEA2P43356 314 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SLC26A2P50443 739 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 CDC42EP1Q00587 391 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 FMO1Q01740 532 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 KRT33BQ14525 404 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 TAB1Q15750 504 aa11.12□□□□□ -0.63
CPNE4-209ENST00000512055 SPDYE7PQ495Y7 208 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms