RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 BLVRAP53004 296 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ESRRGP62508 458 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DYNLL1P63167 89 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KRT85P78386 507 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MS4A2Q01362 244 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 AMPD3Q01432 767 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 HGFACQ04756 655 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GRSF1Q12849 480 aaKnown RBP eCLIP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDAP1Q13442 181 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SAFB2Q14151 953 aaKnown RBP eCLIP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPS6KA2Q15349 733 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARL13BQ3SXY8 428 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC40Q4G0X9 1142 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TAPT1Q6NXT6 567 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 EEPD1Q7L9B9 569 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DTX1Q86Y01 620 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MCF2L2Q86YR7 1114 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ANKRD35Q8N283 1001 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARHGEF39Q8N4T4 335 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GPATCH11Q8N954 259 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 BANPQ8N9N5 519 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CNBD1Q8NA66 436 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZSCAN1Q8NBB4 408 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPC24Q8NBT2 197 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF280CQ8ND82 737 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAIP1Q8WWC4 291 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 WBP2Q969T9 261 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RBM17Q96I25 401 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MRPS26Q9BYN8 205 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM129AQ9BZQ8 928 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NSRP1Q9H0G5 558 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 BOLA2Q9H3K6 86 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PLEKHA4Q9H4M7 779 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RXFP1Q9HBX9 757 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TXNRD2Q9NNW7 524 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PNPLA8Q9NP80 782 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 IRAK4Q9NWZ3 460 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 VPS18Q9P253 973 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 VPS28Q9UK41 221 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCPG1Q9ULG6 757 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 AHCTF1Q8WYP5 2266 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DSPPQ9NZW4 1301 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CSPG4Q6UVK1 2322 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 BICDL2A1A5D9 508 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC24A2A3L6 582 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 C19orf81C9J6K1 198 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 FCN1O00602 326 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 OR6B1O95007 311 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TDP2O95551 362 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CPNE6O95741 557 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYP1A2P05177 515 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KRT8P05787 483 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 HLA-DOAP06340 250 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 C4BPBP20851 252 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 OSBPP22059 807 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PAX7P23759 505 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ITGB8P26012 769 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 HARS2P49590 506 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NPEPPSP55786 919 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 EIF3BP55884 814 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 AP1S1P61966 158 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ASIC1P78348 528 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 IRX4P78413 519 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MRPS25P82663 173 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYP27A1Q02318 531 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ICA1Q05084 483 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KCNH2Q12809 1159 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SF3A3Q12874 501 aaKnown RBP eCLIP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 FLOT2Q14254 428 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAPK6Q16659 721 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KYAT1Q16773 422 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SKIDA1Q1XH10 827 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PARP15Q460N3 678 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 LIPMQ5VYY2 423 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 IYDQ6PHW0 289 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 FASTKD5Q7L8L6 764 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 HDDC2Q7Z4H3 204 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CROCCP2Q86T23 111 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RBM23Q86U06 439 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC65Q8IXS2 484 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NIPA2Q8N8Q9 360 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 OR2W6PQ8NHA6 318 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MRPS27Q92552 414 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NXPE3Q969Y0 559 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC25Q96NG3 672 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PANX3Q96QZ0 392 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAK16Q9BXY0 300 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MIS12Q9H081 205 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DDX47Q9H0S4 455 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 C12orf65Q9H3J6 166 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NOL6Q9H6R4 1146 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTNNAL1Q9UBT7 734 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MBD1Q9UIS9 605 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 UTP18Q9Y5J1 556 aaKnown RBP eCLIP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CEPT1Q9Y6K0 416 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TLN2Q9Y4G6 2542 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARHGAP21Q5T5U3 1957 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 LRP1BQ9NZR2 4599 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms