RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 MRI1Q9BV20 369 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 WDR11Q9BZH6 1224 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 FAM30AQ9NZY2 134 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 MTF2Q9Y483 593 aaPredicted RBP6.29□□□□□ -1.4
GYPB-212ENST00000511198 KIAA1671Q9BY89 1806 aa6.29□□□□□ -1.4
GYPB-212ENST00000511198 ADGRA3Q8IWK6 1321 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 ZFHX3Q15911 3703 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 FPR1P21462 350 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 COPB2P35606 906 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 ANP32AP39687 249 aaKnown RBP6.28□□□□□ -1.4
GYPB-212ENST00000511198 PER3P56645 1201 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 NANOS3P60323 173 aaKnown RBP6.28□□□□□ -1.4
GYPB-212ENST00000511198 MGAT2Q10469 447 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 CERKLQ49MI3 558 aaPredicted RBP6.28□□□□□ -1.4
GYPB-212ENST00000511198 RRP12Q5JTH9 1297 aaKnown RBP6.28□□□□□ -1.4
GYPB-212ENST00000511198 COLEC12Q5KU26 742 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 CCDC30Q5VVM6 783 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 SLC4A10Q6U841 1118 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 Q6YL49 198 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 RHOT2Q8IXI1 618 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 CELF5Q8N6W0 485 aaKnown RBP6.28□□□□□ -1.4
GYPB-212ENST00000511198 BEND2Q8NDZ0 799 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 OR2I1PQ8NGU4 316 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 ATL2Q8NHH9 583 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 NSUN4Q96CB9 384 aaKnown RBP6.28□□□□□ -1.4
GYPB-212ENST00000511198 CDCA3Q99618 268 aaPredicted RBP6.28□□□□□ -1.4
GYPB-212ENST00000511198 ADI1Q9BV57 179 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 TMX1Q9H3N1 280 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 LDAHQ9H6V9 325 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 PRKRIP1Q9H875 184 aaPredicted RBP6.28□□□□□ -1.4
GYPB-212ENST00000511198 LANCL2Q9NS86 450 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 SYBUQ9NX95 663 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 SLC23A1Q9UHI7 598 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 RAB23Q9ULC3 237 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 GPR45Q9Y5Y3 372 aa6.28□□□□□ -1.4
GYPB-212ENST00000511198 FLT1P17948 1338 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 IL16Q14005 1332 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 POLQO75417 2590 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 ENO4A6NNW6 628 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 RHOBTB3O94955 611 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 ELANEP08246 267 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 SPATA31D3P0C874 917 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 TDGF1P13385 188 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 AGXTP21549 392 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 ADRA1BP35368 520 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 MTHFRP42898 656 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 ALDH1A3P47895 512 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 CPT1AP50416 773 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 RAP2BP61225 183 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 ITIH3Q06033 890 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 BTG3Q14201 252 aaPredicted RBP6.27□□□□□ -1.41
GYPB-212ENST00000511198 DUSP28Q4G0W2 176 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 HECTD2Q5U5R9 776 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 CES5AQ6NT32 575 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 SPATA31D4Q6ZUB0 917 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 MED25Q71SY5 747 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 SESTD1Q86VW0 696 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 FBXO16Q8IX29 292 aaPredicted RBP6.27□□□□□ -1.41
GYPB-212ENST00000511198 SLC44A3Q8N4M1 653 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 C12orf76Q8N812 135 aaPredicted RBP6.27□□□□□ -1.41
GYPB-212ENST00000511198 DNAAF4Q8WXU2 420 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 ZG16BQ96DA0 208 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 SLC2A13Q96QE2 648 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 TOR3AQ9H497 397 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 KLHL11Q9NVR0 708 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 MOCS1Q9NZB8 636 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 AJAP1Q9UKB5 411 aaPredicted RBP6.27□□□□□ -1.41
GYPB-212ENST00000511198 FPGT-TNNI3KV9GXZ4 949 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 MIA3Q5JRA6 1907 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 ATMQ13315 3056 aa6.27□□□□□ -1.41
GYPB-212ENST00000511198 APC2O95996 2303 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 UNC119BA6NIH7 251 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 ENDOD1O94919 500 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 CFIP05156 583 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 ZNF853P0CG23 659 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 RAP2AP10114 183 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 DDX6P26196 483 aaKnown RBP eCLIP6.26□□□□□ -1.41
GYPB-212ENST00000511198 PCSK1P29120 753 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 SHMT1P34896 483 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 STARD6P59095 220 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 GUCY1B3Q02153 619 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 LMOD3Q0VAK6 560 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 SCAPQ12770 1279 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 RESTQ13127 1097 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 KLF1Q13351 362 aaPredicted RBP6.26□□□□□ -1.41
GYPB-212ENST00000511198 TP53BP2Q13625 1128 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 INAVAQ3KP66 663 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 DCLRE1AQ6PJP8 1040 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 DDX42Q86XP3 938 aaKnown RBP eCLIP6.26□□□□□ -1.41
GYPB-212ENST00000511198 DRC7Q8IY82 874 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 OR56A1Q8NGH5 318 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 CASKIN2Q8WXE0 1202 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 MYOCQ99972 504 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 TEX13BQ9BXU2 312 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 CYP4F11Q9HBI6 524 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 ARHGEF3Q9NR81 526 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 GNL3LQ9NVN8 582 aaKnown RBP6.26□□□□□ -1.41
GYPB-212ENST00000511198 ACTL7AQ9Y615 435 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 PTPRQQ9UMZ3 2332 aa6.26□□□□□ -1.41
GYPB-212ENST00000511198 DENND4AQ7Z401 1863 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms