RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 UBXN2BQ14CS0 331 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 PGM5Q15124 567 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 LY6KQ17RY6 165 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 LSM12Q3MHD2 195 aaKnown RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 ARHGEF16Q5VV41 709 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 NAIF1Q69YI7 327 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 PPP4R3AQ6IN85 833 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 NFRKBQ6P4R8 1299 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 CASC1Q6TDU7 716 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 SEPT14Q6ZU15 432 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 ZNF365Q70YC5 407 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 HTR3DQ70Z44 454 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 TPH2Q8IWU9 490 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 TMTC2Q8N394 836 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 DCBLD1Q8N8Z6 715 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 IFI44Q8TCB0 444 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 AFG1LQ8WV93 481 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 HERVK_113Q902F9 699 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 KAT2BQ92831 832 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 ZNF503Q96F45 646 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 MAP3K14Q99558 947 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 ZNF747Q9BV97 191 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 RHOBTB2Q9BYZ6 727 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 GTPBP4Q9BZE4 634 aaKnown RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 SCAND2PQ9GZW5 306 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 TTYH1Q9H313 450 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 HIPK3Q9H422 1215 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 LY9Q9HBG7 655 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 PXMP2Q9NR77 195 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 SLC2A4RGQ9NR83 387 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 AURKAIP1Q9NWT8 199 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 CLCA2Q9UQC9 943 aa3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 REXO2Q9Y3B8 237 aaKnown RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 USP15Q9Y4E8 981 aaPredicted RBP3.97□□□□□ -1.77
UBE2D3-226ENST00000508635 MCM3APO60318 1980 aa3.96□□□□□ -1.77
UBE2D3-226ENST00000508635 LAMA2P24043 3122 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 MYH6P13533 1939 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 AHRRA9YTQ3 701 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 NPIPB8E9PQR5 432 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 TEX33O43247 280 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 EIF5BO60841 1220 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 PPFIA4O75335 1185 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 RECQL4O94761 1208 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 REC8O95072 547 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 PRSS23O95084 383 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 PLEKHA8P1O95397 391 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 POU2F2P09086 479 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CALM1P0DP23 149 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CALM2P0DP24 149 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CALM3P0DP25 149 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CYP2C9P11712 490 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 MYCLP12524 364 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 C6P13671 934 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CASTP20810 708 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 TACR2P21452 398 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 MGAT1P26572 445 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 KIF5BP33176 963 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 EPHB1P54762 984 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CCL23P55773 120 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CTXN1P60606 82 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 FAM189BP81408 668 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 SP2Q02086 613 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 DSC2Q02487 901 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 ZNF267Q14586 743 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 PTGISQ16647 500 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 ADCK5Q3MIX3 580 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 KHDC1Q4VXA5 237 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CELF3Q5SZQ8 465 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 IGFL4Q6B9Z1 124 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 PSRC1Q6PGN9 363 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 DRICH1Q6PGQ1 229 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 KCNV1Q6PIU1 500 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 SEM1Q6ZVN7 128 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 USP45Q70EL2 814 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 GDF7Q7Z4P5 450 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 TTC7BQ86TV6 843 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 SESTD1Q86VW0 696 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 PLXDC1Q8IUK5 500 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 GRAMD1CQ8IYS0 662 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 ZNF276Q8N554 614 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 SRBD1Q8N5C6 995 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 FANCBQ8NB91 859 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 SLC17A8Q8NDX2 589 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 IL31RAQ8NI17 732 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 PPTC7Q8NI37 304 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CTCFLQ8NI51 663 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CACTINQ8WUQ7 758 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 PIBF1Q8WXW3 757 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 RRP36Q96EU6 259 aaKnown RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 MRGPRX4Q96LA9 322 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 NEK1Q96PY6 1258 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CTAGE1Q96RT6 745 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 DMRTA2Q96SC8 542 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 NEU1Q99519 415 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 CDX2Q99626 313 aaPredicted RBP3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 LZTS2Q9BRK4 669 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 SPZ1Q9BXG8 430 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 AGXT2Q9BYV1 514 aa3.96□□□□□ -1.78
UBE2D3-226ENST00000508635 TM6SF1Q9BZW5 370 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms