RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 RFKQ969G6 155 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 BICD1Q96G01 975 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 GDAP1L1Q96MZ0 367 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 ZNF396Q96N95 335 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 SPAG5Q96R06 1193 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 RUFY1Q96T51 708 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 MPHOSPH6Q99547 160 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 BRD9Q9H8M2 597 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 ZCCHC17Q9NP64 241 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 SLAMF7Q9NQ25 335 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 MAN1C1Q9NR34 630 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 GOLGA6AQ9NYA3 693 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 DACT1Q9NYF0 836 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 DKK3Q9UBP4 350 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 NRBP1Q9UHY1 535 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 CDC23Q9UJX2 597 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 USP6P35125 1406 aa4.95□□□□□ -1.62
PDLIM5-211ENST00000508531 PARP4Q9UKK3 1724 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 COL5A2P05997 1499 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 TOPAZ1Q8N9V7 1692 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 A0A0G2JLW4 131 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CTAGE9A4FU28 777 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 LINC01548A6NM66 108 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 USP27XA6NNY8 438 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 H3BQF6 201 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 FZD9O00144 591 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 NDUFAB1O14561 156 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 PRC1O43663 620 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 TRIAP1O43715 76 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 WDHD1O75717 1129 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 SEC31AO94979 1220 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 RPLP2P05387 115 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 HNRNPCP07910 306 aaKnown RBP eCLIP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 GJB1P08034 283 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 GNAI3P08754 354 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 EPB41P11171 864 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 ZKSCAN1P17029 563 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 DRD4P21917 467 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CCT5P48643 541 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CTCFP49711 727 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 GNAI1P63096 354 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 ACTN3Q08043 901 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 GRM1Q13255 1194 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 RIPK1Q13546 671 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 LAMB3Q13751 1172 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 LLGL1Q15334 1064 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 HSP90AB2PQ58FF8 381 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 ALS2CLQ60I27 953 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 EGFLAMQ63HQ2 1017 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 NUGGCQ68CJ6 796 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 TTC19Q6DKK2 380 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 SUMO4Q6EEV6 95 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 ZNF425Q6IV72 752 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 KLHL10Q6JEL2 608 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 TAF2Q6P1X5 1199 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CPLX2Q6PUV4 134 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 ZNF782Q6ZMW2 699 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC121Q6ZUS5 278 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 TTC7BQ86TV6 843 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 SESTD1Q86VW0 696 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 PDSS2Q86YH6 399 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 PSD4Q8NDX1 1056 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 OR8K1Q8NGG5 319 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CFAP61Q8NHU2 1237 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 FAM81AQ8TBF8 368 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 JAKMIP2Q96AA8 810 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 FKBP10Q96AY3 582 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 SPDL1Q96EA4 605 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC51Q96ER9 411 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 TTC14Q96N46 770 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 ALG8Q9BVK2 526 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 ACTRT3Q9BYD9 372 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 TRIM7Q9C029 511 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 AMBRA1Q9C0C7 1298 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CCDC8Q9H0W5 538 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 ALDH8A1Q9H2A2 487 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CWC25Q9NXE8 425 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 EHD3Q9NZN3 535 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 FLRT1Q9NZU1 646 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 SERGEFQ9UGK8 458 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 MTMR6Q9Y217 621 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 ATP8A1Q9Y2Q0 1164 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CFAP20Q9Y6A4 193 aaKnown RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 KDM6AO15550 1401 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 IFT172Q9UG01 1749 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 UBN2Q6ZU65 1347 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 CDHR2Q9BYE9 1310 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 LRRC37A3O60309 1634 aa4.94□□□□□ -1.62
PDLIM5-211ENST00000508531 KIF1BO60333 1816 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CFAP73A6NFT4 308 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 LRRC14BA6NHZ5 514 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 NT5C1B-RDH14C9J2C7 533 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 HIP1O00291 1037 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CREB3O43889 395 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 CEP104O60308 925 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 VPS4BO75351 444 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 RASSF9O75901 435 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 GHRP10912 638 aa4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 TOP1P11387 765 aaKnown RBP4.93□□□□□ -1.62
PDLIM5-211ENST00000508531 ZFXP17010 805 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms