RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 PRDM8Q9NQV8 689 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 MBIPQ9NS73 344 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 NKIRAS1Q9NYS0 192 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 PKD2L2Q9NZM6 624 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 TMOD2Q9NZR1 351 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 MALT1Q9UDY8 824 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 FBXO40Q9UH90 709 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 ABCA8O94911 1581 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 SETBP1Q9Y6X0 1596 aa11.12□□□□□ -0.63
PDLIM5-210ENST00000508216 A6NJY4 79 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 MEI4A8MW99 385 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 PGRMC1O00264 195 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 IFRD1O00458 451 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 DAPK3O43293 454 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 TOM1L1O75674 476 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 CAMTA2O94983 1202 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ATP6V1B1P15313 513 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 GARTP22102 1010 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ARL1P40616 181 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 SLC12A2P55011 1212 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 RAB14P61106 215 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 TXNL4AP83876 142 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 NAB2Q15742 525 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 TBCCQ15814 346 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 CLUL1Q15846 466 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 DDR2Q16832 855 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 LRRC36Q1X8D7 754 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ANKRD26P1Q6NSI1 321 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 TRMT10CQ7L0Y3 403 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 SH3RF1Q7Z6J0 888 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 C2CD5Q86YS7 1000 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 SLC15A4Q8N697 577 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 RAB3IL1Q8TBN0 382 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 S100ZQ8WXG8 99 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 GLG1Q92896 1179 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ASB2Q96Q27 587 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ZSCAN5AQ9BUG6 496 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 KIFC1Q9BW19 673 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 RPF2Q9H7B2 306 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 EIF3KQ9UBQ5 218 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 EXTL2Q9UBQ6 330 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 TFR2Q9UP52 801 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 SIK3Q9Y2K2 1263 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 DTNAQ9Y4J8 743 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 DLG5Q8TDM6 1919 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 CCDC163A0A0D9SF12 145 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ISPDA4D126 451 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 GOLGA8SH3BPF8 625 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 PLK4O00444 970 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 TXNDC9O14530 226 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 PLA2G6O60733 806 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 CYP3A4P08684 503 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 SRGAP2BP0DMP2 458 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 NR4A1P22736 598 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 CCNE1P24864 410 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 CIITAP33076 1130 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 STAT1P42224 750 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 NPTX2P47972 431 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 NPEPPSP55786 919 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 LGALS3BPQ08380 585 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ITGADQ13349 1161 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 TOMM20Q15388 145 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 PDK4Q16654 411 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 SUPT20HL1Q3ZLR7 823 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ARSHQ5FYA8 562 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 UGT3A1Q6NUS8 523 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 SULF1Q8IWU6 871 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 SRBD1Q8N5C6 995 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 ADCY4Q8NFM4 1077 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 OR5H6Q8NGV6 325 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 GTF3C2Q8WUA4 911 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 PHOX2BQ99453 314 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 MLPHQ9BV36 600 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 STARD7Q9NQZ5 370 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 PKD2L1Q9P0L9 805 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 CNTN3Q9P232 1028 aa11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 EVLQ9UI08 416 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-210ENST00000508216 PCM1Q15154 2024 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 SF3B1O75533 1304 aaKnown RBP eCLIP11.1□□□□□ -0.633e-6■■■■■ 150.5
PDLIM5-210ENST00000508216 CLTCQ00610 1675 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 A0A0A6YYJ9 748 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 A0A1W2PQ72 361 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 EFCAB10A6NFE3 127 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 DBX1A6NMT0 343 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 KCNJ18B7U540 433 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 CLDN25C9JDP6 229 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 SLCO1B7G3V0H7 640 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 ZBTB14O43829 449 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 GAS2O43903 313 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 MAN1A2O60476 641 aa11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 CCNT2O60583 730 aaKnown RBP11.1□□□□□ -0.63
PDLIM5-210ENST00000508216 SERPINI2O75830 405 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms