RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CDK4P11802 303 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 NPR1P16066 1061 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 ARNTP27540 789 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 TXKP42681 527 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 PSEN2P49810 448 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 EPHB4P54760 987 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 MFAP3P55082 362 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 MAP3K7CLP57077 242 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 INPP5AQ14642 412 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 HS1BP3Q53T59 392 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 MBNL2Q5VZF2 373 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 ERICH5Q6P6B1 374 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 TAS2R42Q7RTR8 314 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 NUDT13Q86X67 352 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 SP8Q8IXZ3 490 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 LPCAT1Q8NF37 534 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 SLC22A17Q8WUG5 538 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 KAT5Q92993 513 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 SDCCAG3Q96C92 435 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 LRRC39Q96DD0 335 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 MRPL38Q96DV4 380 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 PLPPR2Q96GM1 343 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 RBM17Q96I25 401 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 LRCH3Q96II8 777 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 CAMK1GQ96NX5 476 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 TUBGCP5Q96RT8 1024 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 PRPF18Q99633 342 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 RAD9AQ99638 391 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 NKX2-4Q9H2Z4 354 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 MAGEE1Q9HCI5 957 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 RBM12Q9NTZ6 932 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 TAS2R10Q9NYW0 307 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 CNIH4Q9P003 139 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 INTS6Q9UL03 887 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 SNX6Q9UNH7 406 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 DAPK1P53355 1430 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 FRMD3A2A2Y4 597 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 GSAPA4D1B5 854 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 NPIPB15A6NHN6 443 aaPredicted RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 NPHS1O60500 1241 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 GALTP07902 379 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 ZFYP08048 801 aaPredicted RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 WEE2P0C1S8 567 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 RALAP11233 206 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 PAFAH1B1P43034 410 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 PLCD1P51178 756 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 BMXP51813 675 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 MLLT6P55198 1093 aaPredicted RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 RPS16P62249 146 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 RPP30P78346 268 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 SCN1BQ07699 218 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 MED22Q15528 200 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 HSP90AA4PQ58FG1 418 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 TMEM201Q5SNT2 666 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 MAP1SQ66K74 1059 aaPredicted RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 ANKRD40Q6AI12 368 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 OTOP1Q7RTM1 612 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 TSPEARQ8WU66 669 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 WNT8BQ93098 351 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 PERPQ96FX8 193 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 SPSB2Q99619 263 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 SH3GL3Q99963 347 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 NAA11Q9BSU3 229 aaPredicted RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 TRIM62Q9BVG3 475 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 PRR14Q9BWN1 585 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 USP26Q9BXU7 913 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 LY9Q9HBG7 655 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 FBRSL1Q9HCM7 1045 aaKnown RBP7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 TMEM8AQ9HCN3 771 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 PFDN4Q9NQP4 134 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 CENPMQ9NSP4 180 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 CFAP97Q9P2B7 532 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 STX8Q9UNK0 236 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 ZNF536O15090 1300 aa7.79□□□□□ -1.16
PDGFRA-206ENST00000508170 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 RRP8O43159 456 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 TGFB1I1O43294 461 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 KRT86O43790 486 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 NUDT21O43809 227 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 ACSL4O60488 711 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 LILRB5O75023 590 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 KLHL18O94889 574 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 ADH1AP07327 375 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 TUBBP07437 444 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 CNPP09543 421 aaKnown RBP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 BMP1P13497 986 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 MCM3P25205 808 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 ANXA13P27216 316 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 AVPR2P30518 371 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 PRKCIP41743 596 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 IRAK1P51617 712 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 TUBB4BP68371 445 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 PRAMEP78395 509 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 TUBB2AQ13885 445 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 FAM187BQ17R55 369 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 PRICKLE4Q2TBC4 344 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 MFSD7Q6UXD7 560 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 CATSPERGQ6ZRH7 1159 aa7.78□□□□□ -1.16
PDGFRA-206ENST00000508170 GATAD2AQ86YP4 633 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms