RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 TXNDC8Q6A555 127 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 TRNP1Q6NT89 227 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 LRIG3Q6UXM1 1119 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 SLC26A9Q7LBE3 791 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 SIK2Q9H0K1 926 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 MARCH2Q9P0N8 246 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 SFMBT1Q9UHJ3 866 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 SCML2Q9UQR0 700 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 SCAMP3O14828 347 aaKnown RBP11.42□□□□□ -0.58
PROM1-207ENST00000508167 VNN2O95498 520 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 SHBGP04278 402 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 NOS2P35228 1153 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 HNRNPH2P55795 449 aaKnown RBP11.42□□□□□ -0.58
PROM1-207ENST00000508167 DR1Q01658 176 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 CBX2Q14781 532 aaPredicted RBP11.42□□□□□ -0.58
PROM1-207ENST00000508167 FAM172AQ8WUF8 416 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 IRGQQ8WZA9 623 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 MCRS1Q96EZ8 462 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 LAMA2P24043 3122 aaKnown RBP11.42□□□□□ -0.58
PROM1-207ENST00000508167 APOEP02649 317 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 MAN1A1P33908 653 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 COILP38432 576 aaPredicted RBP11.42□□□□□ -0.58
PROM1-207ENST00000508167 PIGHQ14442 188 aaPredicted RBP11.42□□□□□ -0.58
PROM1-207ENST00000508167 OLFML1Q6UWY5 402 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 FAM131BQ86XD5 332 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 CDX2Q99626 313 aaPredicted RBP11.42□□□□□ -0.58
PROM1-207ENST00000508167 CNPY3Q9BT09 278 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 MTCH2Q9Y6C9 303 aa11.42□□□□□ -0.58
PROM1-207ENST00000508167 GABBR2O75899 941 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 TRUB2O95900 331 aaKnown RBP11.41□□□□□ -0.58
PROM1-207ENST00000508167 MATKP42679 507 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 ADGRE1Q14246 886 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 ARL13BQ3SXY8 428 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 EFHBQ8N7U6 833 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 ARL14EPQ8N8R7 260 aaPredicted RBP11.41□□□□□ -0.58
PROM1-207ENST00000508167 TLCD1Q96CP7 247 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 CCSER2Q9H7U1 834 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 NLRC5Q86WI3 1866 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 FAM187AA6NFU0 413 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 LLGL1Q15334 1064 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 GLIPR1L2Q4G1C9 344 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 SYPL2Q5VXT5 272 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 KDM7AQ6ZMT4 941 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 NIPA2Q8N8Q9 360 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 FBXO25Q8TCJ0 367 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 HSPH1Q92598 858 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 RIPOR3Q96MK2 946 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 NMUR1Q9HB89 426 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 OLA1Q9NTK5 396 aaKnown RBP11.41□□□□□ -0.58
PROM1-207ENST00000508167 LMCD1Q9NZU5 365 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 DNMT3LQ9UJW3 386 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 SH3BP1Q9Y3L3 701 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 BRWD1Q9NSI6 2320 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 TRAV19A0A0A6YYK7 116 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 HHLA1C9JL84 531 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 GOLGA8KD6RF30 607 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 MSI1O43347 362 aaKnown RBP11.41□□□□□ -0.58
PROM1-207ENST00000508167 NUDT17P0C025 328 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 CDK5RAP1Q96SZ6 601 aaKnown RBP11.41□□□□□ -0.58
PROM1-207ENST00000508167 WDCPQ9H6R7 721 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 LAMA3Q16787 3333 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 PTPRSQ13332 1948 aa11.41□□□□□ -0.58
PROM1-207ENST00000508167 FGF19O95750 216 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 HOXB8P17481 243 aaPredicted RBP11.4□□□□□ -0.58
PROM1-207ENST00000508167 FSHRP23945 695 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 CHRNA3P32297 505 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 GABRB2P47870 512 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 KRT81Q14533 505 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 TEAD2Q15562 447 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 PPP6R3Q5H9R7 873 aaPredicted RBP11.4□□□□□ -0.58
PROM1-207ENST00000508167 KATNAL2Q8IYT4 538 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 UBL4BQ8N7F7 174 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 ST13P5Q8NFI4 369 aaPredicted RBP11.4□□□□□ -0.58
PROM1-207ENST00000508167 CYP2S1Q96SQ9 504 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 ZNF334Q9HCZ1 680 aaPredicted RBP11.4□□□□□ -0.58
PROM1-207ENST00000508167 VWA8A3KMH1 1905 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 TNFRSF10BO14763 440 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 DAB1O75553 588 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 ACTN2P35609 894 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 HARS2P49590 506 aaKnown RBP11.4□□□□□ -0.58
PROM1-207ENST00000508167 IRAK1P51617 712 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 SLC25A11Q02978 314 aaKnown RBP11.4□□□□□ -0.58
PROM1-207ENST00000508167 SERPINB11Q96P15 392 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 TBCBQ99426 244 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 COMMD8Q9NX08 183 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 DNMT3BQ9UBC3 853 aaKnown RBP11.4□□□□□ -0.58
PROM1-207ENST00000508167 LSM7Q9UK45 103 aaKnown RBP11.4□□□□□ -0.58
PROM1-207ENST00000508167 COL4A6Q14031 1691 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 ZNF840PA6NDX5 716 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 PTPN7P35236 360 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 PPP3CCP48454 512 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 FNTAP49354 379 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 TBX4P57082 545 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 SMTNL2Q2TAL5 461 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 RAB41Q5JT25 222 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 LEMD2Q8NC56 503 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 DQX1Q8TE96 717 aaKnown RBP11.4□□□□□ -0.58
PROM1-207ENST00000508167 CEP295NLQ96MC4 621 aa11.4□□□□□ -0.58
PROM1-207ENST00000508167 EURLQ9NYK6 297 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms