RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 NDST3O95803 873 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 PBX1P40424 430 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 KCNJ4P48050 445 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 RPS13P62277 151 aaKnown RBP3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 RAB30Q15771 203 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 PFKFB3Q16875 520 aaPredicted RBP3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 C10orf25Q5T742 122 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 LVRNQ6Q4G3 990 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 PIK3AP1Q6ZUJ8 805 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 TOGARAM2Q6ZUX3 1019 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 LAS2Q8IYD9 372 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 FAM186BQ8IYM0 893 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 TXLNBQ8N3L3 684 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 OSR1Q8TAX0 266 aaPredicted RBP3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 ASB12Q8WXK4 309 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 ZNF566Q969W8 418 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 TMEM41AQ96HV5 264 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 ZNF845Q96IR2 970 aaPredicted RBP3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 SIGLEC11Q96RL6 698 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 SENP7Q9BQF6 1050 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 NUAK2Q9H093 628 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 VPS33BQ9H267 617 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 CDCP1Q9H5V8 836 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 CERS4Q9HA82 394 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 SAP30LQ9HAJ7 183 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 POT1Q9NUX5 634 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 AFG3L2Q9Y4W6 797 aa3.58□□□□□ -1.84
AC008539.1-201ENST00000507653 IGKV2D-30A0A075B6S6 120 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 GOLGA6L3A6NEY3 463 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 ZSCAN9O15535 394 aaPredicted RBP3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 CA12O43570 354 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 TLR2O60603 784 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 CTSAP10619 480 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 PECAM1P16284 738 aaPredicted RBP3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 IGFBP2P18065 325 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 IGHMBP2P38935 993 aaKnown RBP3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 RAE1P78406 368 aaKnown RBP3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 SEMA3BQ13214 749 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 SLC14A1Q13336 389 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 HDAC1Q13547 482 aaPredicted RBP3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 CSHL1Q14406 222 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 SEC23BQ15437 767 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 CNGA3Q16281 694 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 TRIM60Q495X7 471 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 MIDNQ504T8 468 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 TMEM196Q5HYL7 178 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 RUSC1-AS1Q66K80 236 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 IL31Q6EBC2 164 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 RINLQ6ZS11 566 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 PIM3Q86V86 326 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 RASGRP3Q8IV61 690 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 IGFBPL1Q8WX77 278 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 GRAMD1AQ96CP6 724 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 EID2BQ96D98 161 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 TTLL2Q9BWV7 592 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 SPRTNQ9H040 489 aaPredicted RBP3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 ZNF335Q9H4Z2 1342 aaPredicted RBP3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 USP29Q9HBJ7 922 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 PDGFCQ9NRA1 345 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 ZMYM2Q9UBW7 1377 aa3.57□□□□□ -1.84
AC008539.1-201ENST00000507653 CCDC187A0A096LP49 1063 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 PODXLO00592 558 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 NPC1O15118 1278 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 ITGA5P08648 1049 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 CD63P08962 238 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 NPPBP16860 134 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 RPS6KB1P23443 525 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 CCKARP32238 428 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 ZNF84P51523 738 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 SLC12A2P55011 1212 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 DMWDQ09019 674 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 CBFBQ13951 182 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 KRTAP27-1Q3LI81 207 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 MAP9Q49MG5 647 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 Q4G0T1 1027 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 EARS2Q5JPH6 523 aaKnown RBP3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 KIAA1161Q6NSJ0 714 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 MSANTD2Q6P1R3 559 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 FBXO38Q6PIJ6 1188 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 PIP4P1Q86T03 277 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 SRLQ86TD4 932 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 TTC30AQ86WT1 665 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 P3H2Q8IVL5 708 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 WIPF2Q8TF74 440 aaPredicted RBP3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 AKAP1Q92667 903 aaKnown RBP eCLIP3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 SLC39A13Q96H72 371 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 FAR2Q96K12 515 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 TP63Q9H3D4 680 aaPredicted RBP3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 AS3MTQ9HBK9 375 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 AGO4Q9HCK5 861 aaKnown RBP3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 ARFGAP3Q9NP61 516 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 CHST12Q9NRB3 414 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 GJB4Q9NTQ9 266 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 KLHL13Q9P2N7 655 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 ZNF112Q9UJU3 913 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 CEP83Q9Y592 693 aa3.56□□□□□ -1.84
AC008539.1-201ENST00000507653 LOC105369274A0A096LPK9 316 aa3.55□□□□□ -1.84
AC008539.1-201ENST00000507653 LY6G6EA0A0G2JKS1 128 aa3.55□□□□□ -1.84
AC008539.1-201ENST00000507653 LOC102723532A0A0G2JNH3 316 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms