RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, human

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-208	ENST00000506971	A2ML1	A8K2U0	1454 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	UBR1	Q8IWV7	1749 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NALCN	Q8IZF0	1738 aa		4.86	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CGB1	A6NKQ9	187 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	GOLIM4	O00461	696 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TBC1D4	O60343	1298 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	BAIAP3	O94812	1187 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	VNN1	O95497	513 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ONECUT2	O95948	504 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	HSP90AB1	P08238	724 aa	Known RBP	4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NHLRC4	P0CG21	123 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	EPHB2	P29323	1055 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PPM1A	P35813	382 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CACNB3	P54284	484 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	RAB1A	P62820	205 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CYP4F2	P78329	520 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	MPP1	Q00013	466 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TFF2	Q03403	129 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ICA1	Q05084	483 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	BLMH	Q13867	455 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	BECN1	Q14457	450 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	MGAT5B	Q3V5L5	792 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ZNF626	Q68DY1	528 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	RETSAT	Q6NUM9	610 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CYP26C1	Q6V0L0	522 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ZNF783	Q6ZMS7	281 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PARS2	Q7L3T8	475 aa	Known RBP	4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DENND1C	Q8IV53	801 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	KIAA0319L	Q8IZA0	1049 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	FAM109A	Q8N4B1	249 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CYP2W1	Q8TAV3	490 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TMEM171	Q8WVE6	324 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	OSCP1	Q8WVF1	389 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TBC1D5	Q92609	795 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PKNOX2	Q96KN3	472 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	QTRT1	Q9BXR0	403 aa	Known RBP	4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	MS4A7	Q9GZW8	240 aa	Predicted RBP	4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NUP62CL	Q9H1M0	184 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DUSP22	Q9NRW4	184 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TBC1D22B	Q9NU19	505 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ADAMTS5	Q9UNA0	930 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TMEM98	Q9Y2Y6	226 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CD163L1	Q9NR16	1453 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	USP54	Q70EL1	1684 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	FMN2	Q9NZ56	1722 aa		4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	MAP2	P11137	1827 aa	Known RBP	4.85	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TSPOAP1	O95153	1857 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	RIMS2	Q9UQ26	1411 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	FAM170A	A1A519	330 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	KCNU1	A8MYU2	1149 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	AP4M1	O00189	453 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	IPO8	O15397	1037 aa	Known RBP	4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PTMA	P06454	111 aa	Known RBP	4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PEX2	P28328	305 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PPIF	P30405	207 aa	Known RBP	4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ARHGAP25	P42331	645 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SLC11A2	P49281	568 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	MTHFS	P49914	203 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TUBA4A	P68366	448 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	HOXA4	Q00056	320 aa	Predicted RBP	4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TCF15	Q12870	199 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	IDI1	Q13907	227 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	LY6K	Q17RY6	165 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TBC1D25	Q3MII6	688 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SPATA1	Q5VX52	437 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	MIS18BP1	Q6P0N0	1132 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SLC2A7	Q6PXP3	512 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DPY19L3	Q6ZPD9	716 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	C4orf50	Q6ZRC1	276 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	TCP11L2	Q8N4U5	519 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	NKAIN3	Q8N8D7	197 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	ABHD11	Q8NFV4	315 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	OR6B3	Q8NGW1	331 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	USP13	Q92995	863 aa	Predicted RBP	4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	PPP2R3C	Q969Q6	453 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DAZAP1	Q96EP5	407 aa	Known RBP	4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	SEC62	Q99442	399 aa	Known RBP	4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	RWDD1	Q9H446	243 aa	Predicted RBP	4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	RETREG1	Q9H6L5	497 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	BLOC1S4	Q9NUP1	217 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	DDX19B	Q9UMR2	479 aa		4.84	□□□□□ -1.63
CALCOCO2-208	ENST00000506971	CPSF1	Q10570	1443 aa	Known RBP	4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971		A0A087WV62	115 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	WIPF3	A6NGB9	483 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	BTN3A1	O00481	513 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	RGS10	O43665	173 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	TMCC2	O75069	709 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	UBXN7	O94888	489 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	IFIT1	P09914	478 aa	Known RBP	4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	XRCC6	P12956	609 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	RPS6KB1	P23443	525 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	PCSK6	P29122	969 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	LRPAP1	P30533	357 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	VIPR2	P41587	438 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	PRIM2	P49643	509 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	PDE6C	P51160	858 aa		4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	RARS	P54136	660 aa	Known RBP	4.83	□□□□□ -1.64
CALCOCO2-208	ENST00000506971	MYO1E	Q12965	1108 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms