RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 SPAM1P38567 509 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CENPAP49450 140 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ADCY7P51828 1080 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 KIF22Q14807 665 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 WDR43Q15061 677 aaKnown RBP eCLIP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 OXA1LQ15070 435 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NAB2Q15742 525 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 EFHC1Q5JVL4 640 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TMTC4Q5T4D3 741 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ANKRD40Q6AI12 368 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 C11orf57Q6ZUT1 292 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SYT9Q86SS6 491 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 FAM186BQ8IYM0 893 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CACNA2D3Q8IZS8 1091 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CYP4X1Q8N118 509 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 LINC00528Q8N1L1 170 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CRYBG2Q8N1P7 616 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TC2NQ8N9U0 490 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 OR6S1Q8NH40 331 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 IGDCC4Q8TDY8 1250 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TANKQ92844 425 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 FATE1Q969F0 183 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SGK3Q96BR1 496 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DHX58Q96C10 678 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PGBD4Q96DM1 585 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NAA15Q9BXJ9 866 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PFDN4Q9NQP4 134 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 MAN1C1Q9NR34 630 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SLC38A7Q9NVC3 462 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TMEM260Q9NX78 707 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PGPEP1Q9NXJ5 209 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CPNE7Q9UBL6 633 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 AGO1Q9UL18 857 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHGA9Q9Y5G4 932 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHGA7Q9Y5G6 932 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHGA6Q9Y5G7 932 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHGA3Q9Y5H0 932 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHA1Q9Y5I3 950 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 GMPPBQ9Y5P6 360 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HCFC2Q9Y5Z7 792 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 POM121BA6NF01 834 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 RSPH10B2B2RC85 870 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZC3H11AO75152 810 aaKnown RBP eCLIP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CD4P01730 458 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ITGB3P05106 788 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HMGN1P05114 100 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 RSPH10BP0C881 870 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 IDEP14735 1019 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SHMT1P34896 483 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ADCY8P40145 1251 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 MDH1P40925 334 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DPP6P42658 865 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 RXRGP48443 463 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ARFIP2P53365 341 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 RRADP55042 308 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 RUNX1T1Q06455 604 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PTPAQ15257 358 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 IFI16Q16666 785 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 C15orf59Q2T9L4 293 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HABP4Q5JVS0 413 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 FKBP15Q5T1M5 1219 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HHIPL2Q6UWX4 724 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SHISA5Q8N114 240 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CHCHD4Q8N4Q1 142 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 GALNT6Q8NCL4 622 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TBC1D16Q8TBP0 767 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 THAP3Q8WTV1 239 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NAT14Q8WUY8 206 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ARL8AQ96BM9 186 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TBC1D31Q96DN5 1066 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HSPBAP1Q96EW2 488 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DACH2Q96NX9 599 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 MCMBPQ9BTE3 642 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SLC2A11Q9BYW1 496 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 LRMDAQ9H2I8 198 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PCIF1Q9H4Z3 704 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DDX4Q9NQI0 724 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 KCTD5Q9NXV2 234 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 TMOD3Q9NYL9 352 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 NCDNQ9UBB6 729 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 GPSM3Q9Y4H4 160 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CHD5Q8TDI0 1954 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF701M0R085 212 aaPredicted RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 HNRNPRO43390 633 aaKnown RBP2.36□□□□□ -2.03
NEDD4-205ENST00000506154 MAN1A2O60476 641 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SMIM24O75264 130 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 C8BP07358 591 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PCNAP12004 261 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 SLC5A1P13866 664 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ITGB6P18564 788 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 JAK1P23458 1154 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 ACY1Q03154 408 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 KLC1Q07866 573 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CNGA2Q16280 664 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CFAP58Q5T655 872 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DESI1Q6ICB0 168 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 PLEKHA7Q6IQ23 1121 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 CORO6Q6QEF8 472 aa2.36□□□□□ -2.03
NEDD4-205ENST00000506154 DCDC5Q6ZRR9 648 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms