RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 PACSIN3Q9UKS6 424 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 PCDHGB4Q9UN71 923 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 PCDHGB5Q9Y5G0 923 aa12.27□□□□□ -0.45
UBE3D-206ENST00000505226 MYO18AQ92614 2054 aaKnown RBP12.27□□□□□ -0.45
UBE3D-206ENST00000505226 TRIP11Q15643 1979 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 H3BNX3 289 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 PLIN3O60664 434 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 VCLP18206 1134 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 PTPRAP18433 802 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 OAZ1P54368 228 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 LY6KQ17RY6 165 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 SLC5A9Q2M3M2 681 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 ISLR2Q6UXK2 745 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 GDPD5Q8WTR4 605 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 FRMD8Q9BZ67 464 aaPredicted RBP12.26□□□□□ -0.45
UBE3D-206ENST00000505226 CDT1Q9H211 546 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 DMAP1Q9NPF5 467 aaPredicted RBP12.26□□□□□ -0.45
UBE3D-206ENST00000505226 POMPQ9Y244 141 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 ITGAXP20702 1163 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 TGM2P21980 687 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 COPAP53621 1224 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 SURF1Q15526 300 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 PMF1Q6P1K2 205 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 MARK2Q7KZI7 788 aaKnown RBP12.26□□□□□ -0.45
UBE3D-206ENST00000505226 NCAPG2Q86XI2 1143 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 WDR75Q8IWA0 830 aaKnown RBP12.26□□□□□ -0.45
UBE3D-206ENST00000505226 SCUBE3Q8IX30 993 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 PPP1R14CQ8TAE6 165 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 LRRC39Q96DD0 335 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 NLRP4Q96MN2 994 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 R3HDMLQ9H3Y0 253 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 GBA2Q9HCG7 927 aaPredicted RBP12.26□□□□□ -0.45
UBE3D-206ENST00000505226 PTPRFP10586 1907 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.26□□□□□ -0.45
UBE3D-206ENST00000505226 UQCRBP14927 111 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 NDST1P52848 882 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 HDAC4P56524 1084 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 IER5Q5VY09 327 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 SATL1Q86VE3 508 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 SESTD1Q86VW0 696 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 DEFB107AQ8IZN7 70 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 ACTRT2Q8TDY3 377 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 APBB2Q92870 758 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 B3GNT5Q9BYG0 378 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 NRDE2Q9H7Z3 1164 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 MAN1C1Q9NR34 630 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 TMEM216Q9P0N5 145 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 TSPAN16Q9UKR8 245 aa12.26□□□□□ -0.45
UBE3D-206ENST00000505226 APOBEC2Q9Y235 224 aaKnown RBP12.26□□□□□ -0.45
UBE3D-206ENST00000505226 INO80B-WBP1J3KQ70 363 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 ZBTB14O43829 449 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 PIM1P11309 404 aaPredicted RBP12.25□□□□□ -0.45
UBE3D-206ENST00000505226 NIPAL4Q0D2K0 466 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 GRM2Q14416 872 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 PDK2Q15119 407 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 OLFML1Q6UWY5 402 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 SAMD7Q7Z3H4 446 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 RTKN2Q8IZC4 609 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 JDP2Q8WYK2 163 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 HAPLN3Q96S86 360 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 INO80BQ9C086 356 aaPredicted RBP12.25□□□□□ -0.45
UBE3D-206ENST00000505226 PDGFDQ9GZP0 370 aaPredicted RBP12.25□□□□□ -0.45
UBE3D-206ENST00000505226 FZD8Q9H461 694 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 XPNPEP3Q9NQH7 507 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 SORCS3Q9UPU3 1222 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 SPDYE16A6NNV3 312 aaPredicted RBP12.25□□□□□ -0.45
UBE3D-206ENST00000505226 ACKR2O00590 384 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 GCATO75600 419 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 RAG1P15918 1043 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 CYP2F1P24903 491 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 CUL3Q13618 768 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 LAMB3Q13751 1172 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 KCNT2Q6UVM3 1135 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 PACS1Q6VY07 963 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 CATSPERGQ6ZRH7 1159 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 MAP7D3Q8IWC1 876 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 ARNTL2Q8WYA1 636 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 MOCOSQ96EN8 888 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 KLHL4Q9C0H6 718 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 RNPEPQ9H4A4 650 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 ITGA11Q9UKX5 1188 aa12.25□□□□□ -0.45
UBE3D-206ENST00000505226 ALDH1A2O94788 518 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 VDRP11473 427 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 USP4Q13107 963 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 HSDL1Q3SXM5 330 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 BOLA3Q53S33 107 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 NDNQ99608 321 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 LPIN3Q9BQK8 851 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 RPF1Q9H9Y2 349 aaKnown RBP12.24□□□□□ -0.45
UBE3D-206ENST00000505226 SF3B1O75533 1304 aaKnown RBP eCLIP12.24□□□□□ -0.458e-6■■■■■ 107
UBE3D-206ENST00000505226 IGKV6-21A0A0C4DH24 114 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 OPHN1O60890 802 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 KLHL2O95198 593 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 ARIH2O95376 493 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 ATP5BP06576 529 aaKnown RBP12.24□□□□□ -0.45
UBE3D-206ENST00000505226 PABPC4LP0CB38 370 aaKnown RBP12.24□□□□□ -0.45
UBE3D-206ENST00000505226 VAV1P15498 845 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 SERPINB9P50453 376 aa12.24□□□□□ -0.45
UBE3D-206ENST00000505226 MED21Q13503 144 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms