RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 TBCBQ99426 244 aa17.42■□□□□ 0.38
PRKCB-210ENST00000498739 ABHD10Q9NUJ1 306 aa17.42■□□□□ 0.38
PRKCB-210ENST00000498739 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.42■□□□□ 0.385e-7■□□□□ 8.9
PRKCB-210ENST00000498739 ADAMTS1Q9UHI8 967 aa17.42■□□□□ 0.38
PRKCB-210ENST00000498739 STOML2Q9UJZ1 356 aa17.42■□□□□ 0.38
PRKCB-210ENST00000498739 KMT2EQ8IZD2 1858 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 GOLGA6L7A0A1B0GV03 622 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.41■□□□□ 0.38
PRKCB-210ENST00000498739 RTN2O75298 545 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 TULP3O75386 442 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 EGFP01133 1207 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 GZMAP12544 262 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 ABCB4P21439 1286 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 RRM1P23921 792 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 HNRNPH3P31942 346 aaKnown RBP17.41■□□□□ 0.38
PRKCB-210ENST00000498739 CCR1P32246 355 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 MAGEA9P43362 315 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 RPS9P46781 194 aaKnown RBP17.41■□□□□ 0.38
PRKCB-210ENST00000498739 ADKP55263 362 aaKnown RBP17.41■□□□□ 0.38
PRKCB-210ENST00000498739 DEUP1Q05D60 604 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 CCINQ13939 588 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 TSR1Q2NL82 804 aaKnown RBP17.41■□□□□ 0.38
PRKCB-210ENST00000498739 SLC25A52Q3SY17 297 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 FYB2Q5VWT5 728 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 ARCQ7LC44 396 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 ETFBKMTQ8IXQ9 262 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 ATP6V0D2Q8N8Y2 350 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 DTWD2Q8NBA8 298 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 DDI1Q8WTU0 396 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 RXFP2Q8WXD0 754 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 AZIN2Q96A70 460 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 VCPIP1Q96JH7 1222 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 DNAJC7Q99615 494 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 DDX50Q9BQ39 737 aaKnown RBP17.41■□□□□ 0.38
PRKCB-210ENST00000498739 ADAM33Q9BZ11 813 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 DNAJC17Q9NVM6 304 aaKnown RBP17.41■□□□□ 0.38
PRKCB-210ENST00000498739 ZNHIT6Q9NWK9 470 aaKnown RBP17.41■□□□□ 0.38
PRKCB-210ENST00000498739 CALCOCO1Q9P1Z2 691 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 ARHGAP20Q9P2F6 1191 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 SLC12A6Q9UHW9 1150 aa17.41■□□□□ 0.38
PRKCB-210ENST00000498739 AKR1B15C9JRZ8 316 aaPredicted RBP17.4■□□□□ 0.38
PRKCB-210ENST00000498739 CACNG3O60359 315 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 PENKP01210 267 aaPredicted RBP17.4■□□□□ 0.38
PRKCB-210ENST00000498739 FTLP02792 175 aaPredicted RBP17.4■□□□□ 0.38
PRKCB-210ENST00000498739 SLC2A3P11169 496 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 SLC6A4P31645 630 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 ATP11AP98196 1134 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 TBX2Q13207 712 aaPredicted RBP17.4■□□□□ 0.38
PRKCB-210ENST00000498739 ARID5BQ14865 1188 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 MPPE1Q53F39 396 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 FAM133BQ5BKY9 247 aaKnown RBP17.4■□□□□ 0.38
PRKCB-210ENST00000498739 NADSYN1Q6IA69 706 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 RFWD3Q6PCD5 774 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 WDR59Q6PJI9 974 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 SND1Q7KZF4 910 aaKnown RBP eCLIP17.4■□□□□ 0.38
PRKCB-210ENST00000498739 CNGA4Q8IV77 575 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 NT5C3BQ969T7 300 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 P2RY11Q96G91 374 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 MRFAP1L1Q96HT8 127 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 BTN2A3PQ96KV6 586 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 ARHGEF4Q9NR80 690 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 PIGVQ9NUD9 493 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 DEC1Q9P2X7 70 aa17.4■□□□□ 0.38
PRKCB-210ENST00000498739 XPO7Q9UIA9 1087 aaKnown RBP17.4■□□□□ 0.38
PRKCB-210ENST00000498739 TCRBV5S1A1TA0A578 114 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 ANKRD62A6NC57 917 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 C2CD4BA6NLJ0 364 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 SIGLEC16A6NMB1 481 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 KCNU1A8MYU2 1149 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 ATMINO43313 823 aaPredicted RBP17.39■□□□□ 0.37
PRKCB-210ENST00000498739 KAT7O95251 611 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 F9P00740 461 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 APODP05090 189 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 PDGFRAP16234 1089 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 SDC4P31431 198 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 RFC1P35251 1148 aaPredicted RBP17.39■□□□□ 0.37
PRKCB-210ENST00000498739 EIF4A3P38919 411 aaKnown RBP17.39■□□□□ 0.37
PRKCB-210ENST00000498739 ATXN1P54253 815 aaKnown RBP17.39■□□□□ 0.37
PRKCB-210ENST00000498739 MESP2Q0VG99 397 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 PPP2R5DQ14738 602 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 CDO1Q16878 200 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 RAP1GAP2Q684P5 730 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 GRAMD4Q6IC98 578 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 Q6ZS52 159 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 CHSY1Q86X52 802 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 DRC7Q8IY82 874 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 EZH1Q92800 747 aaPredicted RBP17.39■□□□□ 0.37
PRKCB-210ENST00000498739 ZNF653Q96CK0 615 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 TMA16Q96EY4 203 aaKnown RBP17.39■□□□□ 0.37
PRKCB-210ENST00000498739 PGAP3Q96FM1 320 aaPredicted RBP17.39■□□□□ 0.37
PRKCB-210ENST00000498739 MCEEQ96PE7 176 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 CHRDQ9H2X0 955 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 WDCPQ9H6R7 721 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 SPATA6Q9NWH7 488 aaPredicted RBP17.39■□□□□ 0.37
PRKCB-210ENST00000498739 MIA3Q5JRA6 1907 aa17.39■□□□□ 0.37
PRKCB-210ENST00000498739 A0A087X0T9 212 aa17.38■□□□□ 0.37
PRKCB-210ENST00000498739 GFRA2O00451 464 aa17.38■□□□□ 0.37
PRKCB-210ENST00000498739 TRIM24O15164 1050 aa17.38■□□□□ 0.37
PRKCB-210ENST00000498739 RNF40O75150 1001 aa17.38■□□□□ 0.37
PRKCB-210ENST00000498739 FAM228BP0C875 321 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms