RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 ERP27Q96DN0 273 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 ZCWPW1Q9H0M4 648 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 UBN1Q9NPG3 1134 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 ZFATQ9P243 1243 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 LGALS13Q9UHV8 139 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 ABT1Q9ULW3 272 aaKnown RBP11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 ZNF148Q9UQR1 794 aa11.97□□□□□ -0.49
SNRNP200-208ENST00000497539 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 ASGR1P07306 291 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 SKIP12755 728 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 CCDC130P13994 396 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 LMO2P25791 158 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 LHX1P48742 406 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 NEK2P51955 445 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 WDR4P57081 412 aaKnown RBP11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 CBX3Q13185 183 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 DPYSL2Q16555 572 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 P3H1Q32P28 736 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 EFHC1Q5JVL4 640 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 PIAS4Q8N2W9 510 aaPredicted RBP11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 TTC30BQ8N4P2 665 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 NT5C3BQ969T7 300 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 ACSF2Q96CM8 615 aaPredicted RBP11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 TTC25Q96NG3 672 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 RNF157Q96PX1 679 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 SH3GL1Q99961 368 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 NKIRAS1Q9NYS0 192 aa11.96□□□□□ -0.49
SNRNP200-208ENST00000497539 CYB561D2O14569 222 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 UNC5CO95185 931 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 GNRH1P01148 92 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 PDHA1P08559 390 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 CD48P09326 243 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 TSHRP16473 764 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 GM2AP17900 193 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 TKTP29401 623 aaKnown RBP11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 RGS7P49802 495 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 RCN1Q15293 331 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 KCNA10Q16322 511 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 SMTNL2Q2TAL5 461 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 GSTA5Q7RTV2 222 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 LRRC49Q8IUZ0 686 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 MYO1HQ8N1T3 1032 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 CLIP3Q96DZ5 547 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 UROC1Q96N76 676 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 PPCSQ9HAB8 311 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 PREBQ9HCU5 417 aa11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 RCOR3Q9P2K3 495 aaPredicted RBP11.96□□□□□ -0.5
SNRNP200-208ENST00000497539 CFAP69A5D8W1 941 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 RASA4BC9J798 803 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 RASA4O43374 803 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 CYP11A1P05108 521 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 THP07101 528 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 PTPN1P18031 435 aaKnown RBP11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 IL4RP24394 825 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 CCND3P30281 292 aaPredicted RBP11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 CLCN2P51788 898 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 TRIM32Q13049 653 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 RASA2Q15283 850 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 KCNT1Q5JUK3 1230 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 ZNF618Q5T7W0 954 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 AGMOQ6ZNB7 445 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 PAQR9Q6ZVX9 377 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 SCML4Q8N228 414 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC2A14Q8TDB8 520 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 FAM172AQ8WUF8 416 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 SLC2A13Q96QE2 648 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 TSEN34Q9BSV6 310 aaKnown RBP11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 OSBPL10Q9BXB5 764 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 GOLGA2P5Q9HBQ8 144 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 PTCH2Q9Y6C5 1203 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 ARL5CA6NH57 179 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 PIAS1O75925 651 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 CBX6O95503 412 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 CCDC166P0CW27 439 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 NPR3P17342 541 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 SP3Q02447 781 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 MTFR1Q15390 333 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 TAF5Q15542 800 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 C15orf59Q2T9L4 293 aaPredicted RBP11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 SH3PXD2AQ5TCZ1 1133 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 RFX6Q8HWS3 928 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 RIBC1Q8N443 379 aaPredicted RBP11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 GLIS1Q8NBF1 620 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 TTC8Q8TAM2 541 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 PXYLP1Q8TE99 480 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 NAF1Q96HR8 494 aaKnown RBP11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 MAGEB18Q96M61 343 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 CFAP57Q96MR6 1250 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 EURLQ9NYK6 297 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 PCSK1NQ9UHG2 260 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 CHKBQ9Y259 395 aa11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 TDRD15B5MCY1 1934 aaKnown RBP11.95□□□□□ -0.5
SNRNP200-208ENST00000497539 A0A0U1RQF3 1178 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 E7ESA3 106 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 POC1B-GALNT4F8VUJ3 575 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 HCRTO43612 131 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 FBXO21O94952 628 aa11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
SNRNP200-208ENST00000497539 ENPP1P22413 925 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms