RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 LIN7CQ9NUP9 197 aaKnown RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 SH3BP4Q9P0V3 963 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 SEMA5BQ9P283 1151 aa5.46□□□□□ -1.54
VPS36-206ENST00000497149 ARPP21Q9UBL0 812 aaPredicted RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 WDR33Q9C0J8 1336 aaKnown RBP5.46□□□□□ -1.54
VPS36-206ENST00000497149 COL11A2P13942 1736 aaPredicted RBP5.45□□□□□ -1.54
VPS36-206ENST00000497149 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 B9A039 149 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 CLIC1O00299 241 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 FYB1O15117 783 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 NKX2-8O15522 239 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 MATN1P21941 496 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 PRKAA2P54646 552 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 CUL4BQ13620 913 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 CBFBQ13951 182 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 GALNTL6Q49A17 601 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 ANKRD40Q6AI12 368 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 RINLQ6ZS11 566 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 ARHGEF25Q86VW2 580 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 FTSJ3Q8IY81 847 aaKnown RBP5.45□□□□□ -1.54
VPS36-206ENST00000497149 ADAMTS18Q8TE60 1221 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 CPT1BQ92523 772 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 SDCCAG3Q96C92 435 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 GCC1Q96CN9 775 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 CCDC17Q96LX7 622 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 HS6ST2Q96MM7 605 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 SORCS2Q96PQ0 1159 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 CDCP1Q9H5V8 836 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 SEPSECSQ9HD40 501 aaKnown RBP5.45□□□□□ -1.54
VPS36-206ENST00000497149 NDUFAF4Q9P032 175 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS36-206ENST00000497149 WNT6Q9Y6F9 365 aa5.45□□□□□ -1.54
VPS36-206ENST00000497149 SLC38A8A6NNN8 435 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 BTBD19C9JJ37 291 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 C1QL1O75973 258 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 SERPINA4P29622 427 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 AARSP49588 968 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS36-206ENST00000497149 RPL15P61313 204 aaKnown RBP5.44□□□□□ -1.54
VPS36-206ENST00000497149 WDR5P61964 334 aaKnown RBP5.44□□□□□ -1.54
VPS36-206ENST00000497149 RBM6P78332 1123 aaKnown RBP5.44□□□□□ -1.54
VPS36-206ENST00000497149 MFSD13AQ14CX5 517 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 ADCK5Q3MIX3 580 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 TBRG1Q3YBR2 411 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 HSP90AB4PQ58FF6 505 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 TMEM65Q6PI78 240 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 KYAT3Q6YP21 454 aaKnown RBP5.44□□□□□ -1.54
VPS36-206ENST00000497149 DCDC5Q6ZRR9 648 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 FAM98AQ8NCA5 519 aaKnown RBP5.44□□□□□ -1.54
VPS36-206ENST00000497149 CSGALNACT1Q8TDX6 532 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 THAP4Q8WY91 577 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 RILPL2Q969X0 211 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 ZSCAN31Q96LW9 406 aaPredicted RBP5.44□□□□□ -1.54
VPS36-206ENST00000497149 FYTTD1Q96QD9 318 aaKnown RBP5.44□□□□□ -1.54
VPS36-206ENST00000497149 ELOVL1Q9BW60 279 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 ADGRE3Q9BY15 652 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 TWSG1Q9GZX9 223 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 SERGEFQ9UGK8 458 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 ZNHIT2Q9UHR6 403 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 RAB21Q9UL25 225 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 SPATA31A1Q5TZJ5 1347 aa5.44□□□□□ -1.54
VPS36-206ENST00000497149 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.43□□□□□ -1.54
VPS36-206ENST00000497149 CCDC189A1A4V9 331 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 E7EVH7 732 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 POC1B-GALNT4F8VUJ3 575 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 GCATO75600 419 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 IGLV2-14P01704 120 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 CYP3A4P08684 503 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 FAM3BP58499 235 aaPredicted RBP5.43□□□□□ -1.54
VPS36-206ENST00000497149 LARS2Q15031 903 aaKnown RBP5.43□□□□□ -1.54
VPS36-206ENST00000497149 FBXO47Q5MNV8 452 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 ANKRD45Q5TZF3 282 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 SERPINA13PQ6UXR4 307 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 HERC6Q8IVU3 1022 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 GALNT4Q8N4A0 578 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 AFG1LQ8WV93 481 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 AKAP1Q92667 903 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS36-206ENST00000497149 TRMT61AQ96FX7 289 aaKnown RBP5.43□□□□□ -1.54
VPS36-206ENST00000497149 ABHD16BQ9H3Z7 469 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 PRDM13Q9H4Q3 707 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 KCND3Q9UK17 655 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 FEM1BQ9UK73 627 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 TRPC5Q9UL62 973 aaPredicted RBP5.43□□□□□ -1.54
VPS36-206ENST00000497149 SLC12A4Q9UP95 1085 aa5.43□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3DA0A087WVF3 549 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3IA0A087WXS9 549 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3EA0A087X179 549 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3KA0A087X1G2 549 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3BA6NDS4 549 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3FA6NER0 549 aaPredicted RBP5.42□□□□□ -1.54
VPS36-206ENST00000497149 TTC34A8MYJ7 566 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3LB9A6J9 549 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 KRT38O76015 456 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 CYP21A2P08686 494 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TBC1D3HP0C7X1 549 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 PEPDP12955 493 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 SFPQP23246 707 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS36-206ENST00000497149 AGTR2P50052 363 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 FOXL2P58012 376 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 TLE3Q04726 772 aa5.42□□□□□ -1.54
VPS36-206ENST00000497149 GAB1Q13480 694 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms