RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 FZD10Q9ULW2 581 aa18.97■□□□□ 0.63
RGP1-202ENST00000496906 USP15Q9Y4E8 981 aaPredicted RBP18.97■□□□□ 0.63
RGP1-202ENST00000496906 EYSQ5T1H1 3165 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 KIF2AO00139 706 aaPredicted RBP18.96■□□□□ 0.63
RGP1-202ENST00000496906 PRAMEF12O95522 483 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 APOEP02649 317 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 TUBB4AP04350 444 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 WEE1P30291 646 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 RPS6KA1Q15418 735 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 ARL13BQ3SXY8 428 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 ERMARDQ5T6L9 678 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 ZSCAN18Q8TBC5 510 aaPredicted RBP18.96■□□□□ 0.63
RGP1-202ENST00000496906 ALG3Q92685 438 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 USP13Q92995 863 aaPredicted RBP18.96■□□□□ 0.63
RGP1-202ENST00000496906 NAPGQ99747 312 aaPredicted RBP18.96■□□□□ 0.63
RGP1-202ENST00000496906 GPATCH2LQ9NWQ4 482 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 GDE1Q9NZC3 331 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 CCL26Q9Y258 94 aa18.96■□□□□ 0.63
RGP1-202ENST00000496906 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.96■□□□□ 0.63
RGP1-202ENST00000496906 IRF1P10914 325 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 DNA2P51530 1060 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 PSTKQ8IV42 348 aaKnown RBP18.95■□□□□ 0.62
RGP1-202ENST00000496906 ARID3BQ8IVW6 561 aaPredicted RBP18.95■□□□□ 0.62
RGP1-202ENST00000496906 UNC45BQ8IWX7 931 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 KATNAL2Q8IYT4 538 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 UBL4BQ8N7F7 174 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 WBP2Q969T9 261 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 ACSF2Q96CM8 615 aaPredicted RBP18.95■□□□□ 0.62
RGP1-202ENST00000496906 TDP1Q9NUW8 608 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 CDH7Q9ULB5 785 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 AP4E1Q9UPM8 1137 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 DENND4AQ7Z401 1863 aa18.95■□□□□ 0.62
RGP1-202ENST00000496906 CTAGE9A4FU28 777 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 GRXCR2A6NFK2 248 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 LEFTY2O00292 366 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 GREM1O60565 184 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 MOCS2O96007 188 aaPredicted RBP18.94■□□□□ 0.62
RGP1-202ENST00000496906 HARS2P49590 506 aaKnown RBP18.94■□□□□ 0.62
RGP1-202ENST00000496906 SMAD4Q13485 552 aaKnown RBP18.94■□□□□ 0.62
RGP1-202ENST00000496906 CA9Q16790 459 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 EFHC2Q5JST6 749 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 ATP6V0D2Q8N8Y2 350 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 HSPH1Q92598 858 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 HLA-CQ95604 372 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 BTN2A3PQ96KV6 586 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 HAPLN3Q96S86 360 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.94■□□□□ 0.62
RGP1-202ENST00000496906 KLHL11Q9NVR0 708 aa18.94■□□□□ 0.62
RGP1-202ENST00000496906 DDX56Q9NY93 547 aaKnown RBP18.94■□□□□ 0.62
RGP1-202ENST00000496906 XPO7Q9UIA9 1087 aaKnown RBP18.94■□□□□ 0.62
RGP1-202ENST00000496906 PAGE1O75459 146 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 KLKB1P03952 638 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 TCF3P15923 654 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 CORO1AP31146 461 aaKnown RBP18.93■□□□□ 0.62
RGP1-202ENST00000496906 CASQ1P31415 396 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 RWDD2BP57060 319 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 USP4Q13107 963 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 MTA1Q13330 715 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 DPYSL2Q16555 572 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 DCAF12L1Q5VU92 463 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 DDX42Q86XP3 938 aaKnown RBP eCLIP18.93■□□□□ 0.62
RGP1-202ENST00000496906 RIN3Q8TB24 985 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 SH3RF2Q8TEC5 729 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 ASB16Q96NS5 453 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 MYADMQ96S97 322 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 MAGEB5Q9BZ81 275 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 DHX35Q9H5Z1 703 aaKnown RBP18.93■□□□□ 0.62
RGP1-202ENST00000496906 CFAP97Q9P2B7 532 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 SLC12A6Q9UHW9 1150 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 HELZP42694 1942 aaKnown RBP18.93■□□□□ 0.62
RGP1-202ENST00000496906 MBTPS2O43462 519 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 KRT1P04264 644 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 ARSEP51690 589 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 ZNF77Q15935 545 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 FAM78AQ5JUQ0 283 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 ZFYVE27Q5T4F4 411 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 PIK3R6Q5UE93 754 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 PAPD7Q5XG87 772 aaKnown RBP18.93■□□□□ 0.62
RGP1-202ENST00000496906 Q6ZNB5 142 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 DENND1CQ8IV53 801 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 PYROXD2Q8N2H3 581 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 RAPGEF5Q92565 580 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 SMARCD2Q92925 531 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 AZIN2Q96A70 460 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 KCTD15Q96SI1 283 aaPredicted RBP18.93■□□□□ 0.62
RGP1-202ENST00000496906 PSMB7Q99436 277 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 DCLK3Q9C098 648 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 OSBPL2Q9H1P3 480 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 KIF9Q9HAQ2 790 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 SNX12Q9UMY4 172 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 HS3ST4Q9Y661 456 aa18.93■□□□□ 0.62
RGP1-202ENST00000496906 NUP210Q8TEM1 1887 aaPredicted RBP18.92■□□□□ 0.62
RGP1-202ENST00000496906 KCNK3O14649 394 aa18.92■□□□□ 0.62
RGP1-202ENST00000496906 LATS1O95835 1130 aa18.92■□□□□ 0.62
RGP1-202ENST00000496906 L1CAMP32004 1257 aa18.92■□□□□ 0.62
RGP1-202ENST00000496906 GBP2P32456 591 aaPredicted RBP18.92■□□□□ 0.62
RGP1-202ENST00000496906 CDH6P55285 790 aa18.92■□□□□ 0.62
RGP1-202ENST00000496906 SEMA3BQ13214 749 aa18.92■□□□□ 0.62
RGP1-202ENST00000496906 HTR3DQ70Z44 454 aa18.92■□□□□ 0.62
RGP1-202ENST00000496906 EXD1Q8NHP7 514 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms