RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 LRRC4Q9HBW1 653 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 CNGB3Q9NQW8 809 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 TPX2Q9ULW0 747 aaKnown RBP16.89■□□□□ 0.29
CBX4-204ENST00000495122 HCFC2Q9Y5Z7 792 aa16.89■□□□□ 0.29
CBX4-204ENST00000495122 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.88■□□□□ 0.29
CBX4-204ENST00000495122 TP73O15350 636 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 EIF3HO15372 352 aaKnown RBP eCLIP16.88■□□□□ 0.29
CBX4-204ENST00000495122 CLASP2O75122 1294 aaKnown RBP16.88■□□□□ 0.29
CBX4-204ENST00000495122 GABBR2O75899 941 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 DDHD2O94830 711 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 ABHD2P08910 425 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 CTSAP10619 480 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 TKTP29401 623 aaKnown RBP16.88■□□□□ 0.29
CBX4-204ENST00000495122 NR2C2P49116 596 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 AFF1P51825 1210 aaKnown RBP16.88■□□□□ 0.29
CBX4-204ENST00000495122 HDAC4P56524 1084 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 CBLBQ13191 982 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 C15orf59Q2T9L4 293 aaPredicted RBP16.88■□□□□ 0.29
CBX4-204ENST00000495122 KRT71Q3SY84 523 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 MDH1BQ5I0G3 518 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 RAB41Q5JT25 222 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 KCNT1Q5JUK3 1230 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 SLC9A4Q6AI14 798 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 CLEC20AQ6ZU45 233 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 BEND5Q7L4P6 421 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 DDX53Q86TM3 631 aaKnown RBP16.88■□□□□ 0.29
CBX4-204ENST00000495122 FAM35AQ86V20 835 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 ZNF280BQ86YH2 543 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 VPS52Q8N1B4 723 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 RSAD2Q8WXG1 361 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 NT5C3BQ969T7 300 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 PIWIL1Q96J94 861 aaKnown RBP16.88■□□□□ 0.29
CBX4-204ENST00000495122 SUSD3Q96L08 255 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 CFAP57Q96MR6 1250 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 SLC2A13Q96QE2 648 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 MED10Q9BTT4 135 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 CALN1Q9BXU9 219 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 FRMD8Q9BZ67 464 aaPredicted RBP16.88■□□□□ 0.29
CBX4-204ENST00000495122 PCDH18Q9HCL0 1135 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 CSNK1G1Q9HCP0 422 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 MIOSQ9NXC5 875 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 IRAK3Q9Y616 596 aa16.88■□□□□ 0.29
CBX4-204ENST00000495122 APOL1O14791 398 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 TTC4O95801 387 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 IVLP07476 585 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 LCP1P13796 627 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 HOXB8P17481 243 aaPredicted RBP16.87■□□□□ 0.29
CBX4-204ENST00000495122 NR1D1P20393 614 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 ATP5DP30049 168 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 YWHAZP63104 245 aaKnown RBP16.87■□□□□ 0.29
CBX4-204ENST00000495122 XRCC4Q13426 336 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 LLGL1Q15334 1064 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 P3H1Q32P28 736 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 PAQR9Q6ZVX9 377 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 BZW1Q7L1Q6 419 aaKnown RBP16.87■□□□□ 0.29
CBX4-204ENST00000495122 BNIPLQ7Z465 357 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 THEM5Q8N1Q8 247 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 AUTS2Q8WXX7 1259 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 P3H4Q92791 437 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 RTP4Q96DX8 246 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 CCDC77Q9BR77 488 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 TMEM175Q9BSA9 504 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 SNRNP25Q9BV90 132 aaKnown RBP16.87■□□□□ 0.29
CBX4-204ENST00000495122 APOL5Q9BWW9 433 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 B3GNT5Q9BYG0 378 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 CNOT10Q9H9A5 744 aaKnown RBP16.87■□□□□ 0.29
CBX4-204ENST00000495122 CRTAC1Q9NQ79 661 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 KRT82Q9NSB4 513 aa16.87■□□□□ 0.29
CBX4-204ENST00000495122 SF3B1O75533 1304 aaKnown RBP eCLIP16.87■□□□□ 0.292e-9■■■■■ 30.1
CBX4-204ENST00000495122 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.86■□□□□ 0.29
CBX4-204ENST00000495122 SGK1O00141 431 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 CXCL14O95715 111 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 AGTP01019 485 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 TSHRP16473 764 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 CA8P35219 290 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 LMAN1P49257 510 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 EIF3EP60228 445 aaKnown RBP16.86■□□□□ 0.29
CBX4-204ENST00000495122 ATP11AP98196 1134 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 ROR1Q01973 937 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 ADCY1Q08828 1119 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 ADIGQ0VDE8 80 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 ANKRD20A8PQ5CZ79 823 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 INTS6LQ5JSJ4 861 aaKnown RBP16.86■□□□□ 0.29
CBX4-204ENST00000495122 FAM171BQ6P995 826 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 LEKR1Q6ZMV7 388 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 ZNF771Q7L3S4 317 aaPredicted RBP16.86■□□□□ 0.29
CBX4-204ENST00000495122 PPIL6Q8IXY8 311 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 RIBC1Q8N443 379 aaPredicted RBP16.86■□□□□ 0.29
CBX4-204ENST00000495122 ACSF2Q96CM8 615 aaPredicted RBP16.86■□□□□ 0.29
CBX4-204ENST00000495122 TLCD1Q96CP7 247 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 FAM122AQ96E09 287 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 PGAP3Q96FM1 320 aaPredicted RBP16.86■□□□□ 0.29
CBX4-204ENST00000495122 SERPINB12Q96P63 405 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 CAPS2Q9BXY5 557 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 CDC42EP4Q9H3Q1 356 aaKnown RBP16.86■□□□□ 0.29
CBX4-204ENST00000495122 SEMA4AQ9H3S1 761 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 POPDC2Q9HBU9 364 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 PCDHB8Q9UN66 801 aa16.86■□□□□ 0.29
CBX4-204ENST00000495122 BCLAF3A2AJT9 711 aaKnown RBP16.85■□□□□ 0.29
CBX4-204ENST00000495122 CASTOR2A6NHX0 329 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms