RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 TMEM215Q68D42 235 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 DENND1BQ6P3S1 775 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 FOXR2Q6PJQ5 311 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 KIAA1324Q6UXG2 1013 aaKnown RBP10.01□□□□□ -0.81
MSH5-218ENST00000494646 CPXM2Q8N436 756 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 TRIML1Q8N9V2 468 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 TMA16Q96EY4 203 aaKnown RBP10.01□□□□□ -0.81
MSH5-218ENST00000494646 HSFY1Q96LI6 401 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 EDEM2Q9BV94 578 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 CIPCQ9C0C6 399 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 CD248Q9HCU0 757 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 FSCN3Q9NQT6 498 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 ELOVL2Q9NXB9 296 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 THAP10Q9P2Z0 257 aaPredicted RBP10.01□□□□□ -0.81
MSH5-218ENST00000494646 RWDD2AQ9UIY3 292 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 NAALADL1Q9UQQ1 740 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 SLC27A6Q9Y2P4 619 aa10.01□□□□□ -0.81
MSH5-218ENST00000494646 ATXN2Q99700 1313 aaKnown RBP10.01□□□□□ -0.81
MSH5-218ENST00000494646 IGHV1OR15-9A0A0B4J2B8 117 aa10□□□□□ -0.81
MSH5-218ENST00000494646 LNP1A1A4G5 178 aa10□□□□□ -0.81
MSH5-218ENST00000494646 GFRA2O00451 464 aa10□□□□□ -0.81
MSH5-218ENST00000494646 THAP12O43422 761 aa10□□□□□ -0.81
MSH5-218ENST00000494646 LTFP02788 710 aa10□□□□□ -0.81
MSH5-218ENST00000494646 FYNP06241 537 aa10□□□□□ -0.81
MSH5-218ENST00000494646 ADRB1P08588 477 aa10□□□□□ -0.81
MSH5-218ENST00000494646 NCAM1P13591 858 aa10□□□□□ -0.81
MSH5-218ENST00000494646 GPD2P43304 727 aa10□□□□□ -0.81
MSH5-218ENST00000494646 MTIF2P46199 727 aaKnown RBP10□□□□□ -0.81
MSH5-218ENST00000494646 SGSHP51688 502 aa10□□□□□ -0.81
MSH5-218ENST00000494646 TBX4P57082 545 aa10□□□□□ -0.81
MSH5-218ENST00000494646 ZNF33AQ06730 810 aa10□□□□□ -0.81
MSH5-218ENST00000494646 ZNF234Q14588 700 aa10□□□□□ -0.81
MSH5-218ENST00000494646 TPD52L1Q16890 204 aaPredicted RBP10□□□□□ -0.81
MSH5-218ENST00000494646 HSP90AA4PQ58FG1 418 aa10□□□□□ -0.81
MSH5-218ENST00000494646 TRIM61Q5EBN2 209 aa10□□□□□ -0.81
MSH5-218ENST00000494646 ADGRF1Q5T601 910 aa10□□□□□ -0.81
MSH5-218ENST00000494646 N4BP2L1Q5TBK1 243 aaPredicted RBP10□□□□□ -0.81
MSH5-218ENST00000494646 RFWD3Q6PCD5 774 aa10□□□□□ -0.81
MSH5-218ENST00000494646 SLC36A4Q6YBV0 504 aa10□□□□□ -0.81
MSH5-218ENST00000494646 GBP6Q6ZN66 633 aa10□□□□□ -0.81
MSH5-218ENST00000494646 IRF2BP1Q8IU81 584 aa10□□□□□ -0.81
MSH5-218ENST00000494646 FAM217AQ8IXS0 508 aa10□□□□□ -0.81
MSH5-218ENST00000494646 RGL4Q8IZJ4 473 aa10□□□□□ -0.81
MSH5-218ENST00000494646 ADAM32Q8TC27 787 aa10□□□□□ -0.81
MSH5-218ENST00000494646 CYB5D2Q8WUJ1 264 aa10□□□□□ -0.81
MSH5-218ENST00000494646 UCMAQ8WVF2 138 aa10□□□□□ -0.81
MSH5-218ENST00000494646 ZNF606Q8WXB4 792 aa10□□□□□ -0.81
MSH5-218ENST00000494646 IRGQQ8WZA9 623 aa10□□□□□ -0.81
MSH5-218ENST00000494646 GOLGA1Q92805 767 aa10□□□□□ -0.81
MSH5-218ENST00000494646 MRGPRX1Q96LB2 322 aa10□□□□□ -0.81
MSH5-218ENST00000494646 LSM14BQ9BX40 385 aaKnown RBP10□□□□□ -0.81
MSH5-218ENST00000494646 PRDM16Q9HAZ2 1276 aa10□□□□□ -0.81
MSH5-218ENST00000494646 STIM2Q9P246 746 aa10□□□□□ -0.81
MSH5-218ENST00000494646 NUMA1Q14980 2115 aa10□□□□□ -0.81
MSH5-218ENST00000494646 PCNX2A6NKB5 2137 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 CDX4O14627 284 aaPredicted RBP9.99□□□□□ -0.81
MSH5-218ENST00000494646 CAPN9O14815 690 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 GIPC1O14908 333 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 AP5Z1O43299 807 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 ACSL4O60488 711 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 SYNCRIPO60506 623 aaKnown RBP9.99□□□□□ -0.81
MSH5-218ENST00000494646 TBL1XO60907 577 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 NDUFS2O75306 463 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 KCNK5O95279 499 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 CFIP05156 583 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 EPHX1P07099 455 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 HLA-EP13747 358 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 MAOBP27338 520 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 HOXD9P28356 352 aaPredicted RBP9.99□□□□□ -0.81
MSH5-218ENST00000494646 HLA-FP30511 346 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 GNA15P30679 374 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 SLC6A4P31645 630 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 MAPK8P45983 427 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 ARID5AQ03989 594 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 STARD3Q14849 445 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 FUT11Q495W5 492 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 SYPL2Q5VXT5 272 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 LYSMD4Q5XG99 296 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 MSANTD2Q6P1R3 559 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 ANKS1BQ7Z6G8 1248 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 CACUL1Q86Y37 369 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 TMPRSS6Q8IU80 811 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 SYT12Q8IV01 421 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 SLC41A1Q8IVJ1 513 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 UNC45BQ8IWX7 931 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 SCML4Q8N228 414 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 ZNF366Q8N895 744 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 DDX1Q92499 740 aaKnown RBP9.99□□□□□ -0.81
MSH5-218ENST00000494646 FAM149B1Q96BN6 582 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 CNTNAP3BQ96NU0 1288 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 NUSAP1Q9BXS6 441 aaKnown RBP9.99□□□□□ -0.81
MSH5-218ENST00000494646 SLC2A11Q9BYW1 496 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 CNTNAP3Q9BZ76 1288 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 MKRN2Q9H000 416 aaKnown RBP9.99□□□□□ -0.81
MSH5-218ENST00000494646 TMEM9BQ9NQ34 198 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 CYTH4Q9UIA0 394 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 PILRBQ9UKJ0 227 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 CNTN6Q9UQ52 1028 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 CKAP5Q14008 2032 aa9.99□□□□□ -0.81
MSH5-218ENST00000494646 BECN2A8MW95 431 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms