RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 KLC2Q9H0B6 622 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 BRD8Q9H0E9 1235 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 DPH5Q9H2P9 285 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 PABPC3Q9H361 631 aaKnown RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 RETREG1Q9H6L5 497 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 MED4Q9NPJ6 270 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 ARHGEF4Q9NR80 690 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 ETNK2Q9NVF9 386 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.04□□□□□ -1.28
MSH5-217ENST00000494458 GPATCH2LQ9NWQ4 482 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 SPG21Q9NZD8 308 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 DTLQ9NZJ0 730 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 SAE1Q9UBE0 346 aaPredicted RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 ZMYND8Q9ULU4 1186 aaPredicted RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 IRAK3Q9Y616 596 aa7.04□□□□□ -1.28
MSH5-217ENST00000494458 MRPL42Q9Y6G3 142 aaKnown RBP7.04□□□□□ -1.28
MSH5-217ENST00000494458 IGLV3-10A0A075B6K4 115 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 A0A1W2PQH9 124 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 C5orf60A6NFR6 353 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 DRGXA6NNA5 263 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 E7ESA3 106 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 FAM72CH0Y354 149 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 CAPN9O14815 690 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 MCF2LO15068 1137 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 ALOX15BO15296 676 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 NCAM2O15394 837 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 PAPLNO95428 1278 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 FGBP02675 491 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 GOT1P17174 413 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 ATF6P18850 670 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 EN2P19622 333 aaPredicted RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 YWHAQP27348 245 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 RPL22P35268 128 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 PPM1AP35813 382 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 GJC1P36383 396 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 HSD17B3P37058 310 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 PBX3P40426 434 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 GLUD2P49448 558 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 GPR15P49685 360 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 TUBP50607 506 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 ITGA8P53708 1063 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 PLTPP55058 493 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 GDF10P55107 478 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 EIF3EP60228 445 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 RING1Q06587 406 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 DUSP4Q13115 394 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 MTA1Q13330 715 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 MTMR3Q13615 1198 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 KRT81Q14533 505 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 MORF4L2Q15014 288 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 PRKD1Q15139 912 aaPredicted RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 PPP1R7Q15435 360 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 PSMD5Q16401 504 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 P3H1Q32P28 736 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 ARL13BQ3SXY8 428 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 FAM72AQ5TYM5 149 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 AFMIDQ63HM1 303 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 FAM72DQ6L9T8 149 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 NPNTQ6UXI9 565 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 RFX8Q6ZV50 586 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 TRMT10CQ7L0Y3 403 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 BZW1Q7L1Q6 419 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 RTL10Q7L3V2 364 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 PCGF5Q86SE9 256 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 FAM72BQ86X60 149 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 RFX6Q8HWS3 928 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 KRT222Q8N1A0 295 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 ZCCHC9Q8N567 271 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 TTC9BQ8N6N2 239 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 SLC7A14Q8TBB6 771 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 CASP10Q92851 521 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 FATE1Q969F0 183 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 AZIN2Q96A70 460 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 B3GALT6Q96L58 329 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 FCRL2Q96LA5 508 aaPredicted RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 TMEM121Q9BTD3 319 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 MAK16Q9BXY0 300 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 MCOLN1Q9GZU1 580 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 PLEKHA4Q9H4M7 779 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 DHX35Q9H5Z1 703 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 WDCPQ9H6R7 721 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.03□□□□□ -1.28
MSH5-217ENST00000494458 OLA1Q9NTK5 396 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 DDIT4Q9NX09 232 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 ABI2Q9NYB9 513 aaPredicted RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 PPARGC1AQ9UBK2 798 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 OR12D3Q9UGF7 316 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 TPX2Q9ULW0 747 aaKnown RBP7.03□□□□□ -1.28
MSH5-217ENST00000494458 SHOC2Q9UQ13 582 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 ZNF148Q9UQR1 794 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 LZTS1Q9Y250 596 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 TLR6Q9Y2C9 796 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 CDY1Q9Y6F8 540 aa7.03□□□□□ -1.28
MSH5-217ENST00000494458 PTPRSQ13332 1948 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 GREB1Q4ZG55 1949 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 SLC38A8A6NNN8 435 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 C5orf67F2Z3F1 127 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 H3BQF6 201 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 H3BRJ5 948 aa7.02□□□□□ -1.29
MSH5-217ENST00000494458 CHADO15335 359 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms