RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 PRAMEP78395 509 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 NSUN2Q08J23 767 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 NR1H3Q13133 447 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 KYAT1Q16773 422 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 ANKS1BQ7Z6G8 1248 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 CCDC185Q8N715 623 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 ERLEC1Q96DZ1 483 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 TKTL2Q9H0I9 626 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 CYP4F12Q9HCS2 524 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 MFHAS1Q9Y4C4 1052 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 PAPPAQ13219 1627 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 ZBBXA8MT70 800 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 GIPC1O14908 333 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 MDM4O15151 490 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 STAMBPO95630 424 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 ATP6V1B1P15313 513 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 PITX1P78337 314 aaPredicted RBP11.36□□□□□ -0.59
COL2A1-208ENST00000493991 PDK1Q15118 436 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 C9orf57Q5W0N0 161 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 BBS12Q6ZW61 710 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 TTC30AQ86WT1 665 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 B3GALT6Q96L58 329 aa11.36□□□□□ -0.59
COL2A1-208ENST00000493991 DDX60LQ5H9U9 1706 aaKnown RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 ABCA3Q99758 1704 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 C3orf70A6NLC5 250 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 PQBP1O60828 265 aaKnown RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 PIRTP0C851 137 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 MYL2P10916 166 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 TCN1P20061 433 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 CLCNKBP51801 687 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 STX3Q13277 289 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 ANO4Q32M45 955 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 MMEL1Q495T6 779 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 SPRYD7Q5W111 196 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 OR52K1Q8NGK4 314 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 HTR3CQ8WXA8 447 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 CPT1BQ92523 772 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 RPRD1AQ96P16 312 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 VCX3BQ9H321 246 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 TASP1Q9H6P5 420 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 BATF3Q9NR55 127 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 SHOC2Q9UQ13 582 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 TMEM63AO94886 807 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 AKR1A1P14550 325 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 ZFXP17010 805 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 SP100P23497 879 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 GPD2P43304 727 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 PPM1FP49593 454 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 ITIH4Q14624 930 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 TARBP2Q15633 366 aaKnown RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 DDR2Q16832 855 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 WDTC1Q8N5D0 677 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 POU5F2Q8N7G0 328 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 EMID1Q96A84 441 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 NRDE2Q9H7Z3 1164 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 CHST12Q9NRB3 414 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 SMG5Q9UPR3 1016 aaKnown RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 TRDMT1O14717 391 aaKnown RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 DNAJC8O75937 253 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 SNUPNO95149 360 aaKnown RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 PLK1P53350 603 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 DRG2P55039 364 aaKnown RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 MAXP61244 160 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 USP4Q13107 963 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 XRCC4Q13426 336 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 LAMB3Q13751 1172 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 SLC1A5Q15758 541 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 SLC39A12Q504Y0 691 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 RNF220Q5VTB9 566 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 ATG16L1Q676U5 607 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 CHSY1Q86X52 802 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 GIPC2Q8TF65 315 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 ALKBH8Q96BT7 664 aaKnown RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 PTPRHQ9HD43 1115 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 IARS2Q9NSE4 1012 aaKnown RBP11.35□□□□□ -0.59
COL2A1-208ENST00000493991 PCDH10Q9P2E7 1040 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 VANGL2Q9ULK5 521 aa11.35□□□□□ -0.59
COL2A1-208ENST00000493991 C10orf71Q711Q0 1435 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 TCRBV9S1A1TA0A576 114 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 UGT1A9O60656 530 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 SOAT2O75908 522 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 STBD1O95210 358 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 ACADSBP45954 432 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 PAPOLAP51003 745 aaKnown RBP11.34□□□□□ -0.59
COL2A1-208ENST00000493991 E2F7Q96AV8 911 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 TBC1D10AQ9BXI6 508 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 XYLT2Q9H1B5 865 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 UGT1A7Q9HAW7 530 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 UGT1A10Q9HAW8 530 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 UGT1A8Q9HAW9 530 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 SLC38A7Q9NVC3 462 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 MPP6Q9NZW5 540 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 KIAA1257Q9ULG3 409 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 APOBEC2Q9Y235 224 aaKnown RBP11.34□□□□□ -0.59
COL2A1-208ENST00000493991 PHGDHO43175 533 aaKnown RBP11.34□□□□□ -0.59
COL2A1-208ENST00000493991 KRT36O76013 467 aa11.34□□□□□ -0.59
COL2A1-208ENST00000493991 NUDT17P0C025 328 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms