RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 OR5F1O95221 314 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TRIM16O95361 564 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 CCNE1P24864 410 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ABCG1P45844 678 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ARL4CP56559 192 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 GPR85P60893 370 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TAP1Q03518 808 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 EVX2Q03828 476 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 NR1H3Q13133 447 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 LAMC2Q13753 1193 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TFDP1Q14186 410 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TRIM25Q14258 630 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 NFE2L1Q14494 772 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TMEM67Q5HYA8 995 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 SEL1L2Q5TEA6 688 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ANKRD40Q6AI12 368 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ALKBH5Q6P6C2 394 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 IDO2Q6ZQW0 420 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TXNRD3Q86VQ6 643 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 AFAP1L2Q8N4X5 818 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 JADE3Q92613 823 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 CDKL2Q92772 493 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TTC17Q96AE7 1141 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 DNAJC18Q9H819 358 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 FAM8A1Q9UBU6 413 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TAGLN3Q9UI15 199 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 SCAF8Q9UPN6 1271 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 GJA3Q9Y6H8 435 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ADGRA3Q8IWK6 1321 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 COL2A1P02458 1487 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 FAM205CA6NFA0 338 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 FADS2P1A8MWK0 482 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 FOXN3O00409 490 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 DENRO43583 198 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 HLA-DRAP01903 254 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 NFIAQ12857 509 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 SNAPC2Q13487 334 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 CTTNQ14247 550 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 NEDD8Q15843 81 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 C21orf62-AS1Q17RA5 79 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 KIZQ2M2Z5 673 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 PLEKHG4Q58EX7 1191 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 FAM83BQ5T0W9 1011 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TMEM26Q6ZUK4 368 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 PLEKHM3Q6ZWE6 761 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 KCTD20Q7Z5Y7 419 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 LRRC71Q8N4P6 559 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 CPSF7Q8N684 471 aaKnown RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 CCNYL1Q8N7R7 359 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 HSPH1Q92598 858 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 VPS33AQ96AX1 596 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 SDCCAG3Q96C92 435 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 FEM1CQ96JP0 617 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 FAM84BQ96KN1 310 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 HOXD1Q9GZZ0 328 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 NARFLQ9H6Q4 476 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 IFT22Q9H7X7 185 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 COPS7BQ9H9Q2 264 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 ERVK-5Q9HDB9 667 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 HMG20AQ9NP66 347 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 PKD2L2Q9NZM6 624 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 MARCOQ9UEW3 520 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TLK1Q9UKI8 766 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 PACSIN3Q9UKS6 424 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 TMEM5Q9Y2B1 443 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 BOLA1Q9Y3E2 137 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 PMF1-BGLAPU3KQ54 211 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 CROCCQ5TZA2 2017 aa7.06□□□□□ -1.28
VPS13B-205ENST00000493587 C2orf81A6NN90 581 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 CENPXA8MT69 81 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 EVPLLA8MZ36 301 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 MUSKO15146 869 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 EDIL3O43854 480 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 NUAK1O60285 661 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 HNRNPH3P31942 346 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 NDST2P52849 883 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 RPL26P61254 145 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 CSTF3Q12996 717 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 PTGDRQ13258 359 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 STX3Q13277 289 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 SLC1A5Q15758 541 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 MAN2A1Q16706 1144 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 LSM12Q3MHD2 195 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 MTERF2Q49AM1 385 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 DCLRE1AQ6PJP8 1040 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 ADGRG6Q86SQ4 1221 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 LURAP1LQ8IV03 231 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 PQLC1Q8N2U9 271 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 CCDC24Q8N4L8 307 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF398Q8TD17 642 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 PIK3R3Q92569 461 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 HEXIM2Q96MH2 286 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF560Q96MR9 790 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 SLC2A11Q9BYW1 496 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 FETUBQ9UGM5 382 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 WARS2Q9UGM6 360 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 SMG5Q9UPR3 1016 aaKnown RBP7.05□□□□□ -1.28
VPS13B-205ENST00000493587 SMCHD1A6NHR9 2005 aa7.05□□□□□ -1.28
VPS13B-205ENST00000493587 CLDN25C9JDP6 229 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms