RNA–Protein interactions for RNA: ENST00000493416.5

ABCD3-206, Transcript of ATP binding cassette subfamily D member 3, human

TSL 5

Gene ABCD3, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD3-206	ENST00000493416	ATF3	P18847	181 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	CCND1	P24385	295 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	HOXC13	P31276	330 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	UQCRC1	P31930	480 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	POLD2	P49005	469 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	GAS1	P54826	345 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	PTGR1	Q14914	329 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	SLC4A8	Q2Y0W8	1093 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	NPNT	Q6UXI9	565 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	KSR2	Q6VAB6	950 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	TTC30A	Q86WT1	665 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	MPP5	Q8N3R9	675 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	C12orf76	Q8N812	135 aa	Predicted RBP	4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	PLBD2	Q8NHP8	589 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	TTC8	Q8TAM2	541 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	CDK5RAP3	Q96JB5	506 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	FCRL5	Q96RD9	977 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	GTPBP4	Q9BZE4	634 aa	Known RBP	4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	NUAK2	Q9H093	628 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	RBM38	Q9H0Z9	239 aa	Known RBP	4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	RANBP17	Q9H2T7	1088 aa	Known RBP	4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	PLSCR4	Q9NRQ2	329 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	ARL8B	Q9NVJ2	186 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	STAP2	Q9UGK3	403 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	PGAP2	Q9UHJ9	254 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	TMCC3	Q9ULS5	477 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	GTF2A1L	Q9UNN4	478 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	ATP8A1	Q9Y2Q0	1164 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	TNKS	O95271	1327 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	NISCH	Q9Y2I1	1504 aa		4.09	□□□□□ -1.75
ABCD3-206	ENST00000493416	SLC22A23	A1A5C7	686 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	TMEM233	B4DJY2	109 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416		F8W810	466 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	FIBP	O43427	364 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	ZC3H11A	O75152	810 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	ZNF432	O94892	652 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	TBXAS1	P24557	533 aa	Predicted RBP	4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	PIK3CA	P42336	1068 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	ENTPD1	P49961	510 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	ZNF132	P52740	706 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	DEUP1	Q05D60	604 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	LTB	Q06643	244 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	MCL1	Q07820	350 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	DCTN1	Q14203	1278 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	FAM133B	Q5BKY9	247 aa	Known RBP	4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	NUGGC	Q68CJ6	796 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	MYO1H	Q8N1T3	1032 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	PPHLN1	Q8NEY8	458 aa	Known RBP	4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	OIT3	Q8WWZ8	545 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	SKA1	Q96BD8	255 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	TBC1D20	Q96BZ9	403 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	ZBTB45	Q96K62	511 aa	Predicted RBP	4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	USP29	Q9HBJ7	922 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	RIC8A	Q9NPQ8	531 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	CD93	Q9NPY3	652 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	IP6K2	Q9UHH9	426 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	CDY1	Q9Y6F8	540 aa		4.08	□□□□□ -1.76
ABCD3-206	ENST00000493416	IPO8	O15397	1037 aa	Known RBP	4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	PAPSS2	O95340	614 aa	Predicted RBP	4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	PSMA3	P25788	255 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	CASQ1	P31415	396 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	CD151	P48509	253 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	GPC5	P78333	572 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	IFT88	Q13099	833 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	CTBP1	Q13363	440 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	SPECC1	Q5M775	1068 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	WDR45B	Q5MNZ6	344 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	CACHD1	Q5VU97	1274 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	NADSYN1	Q6IA69	706 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	RBM23	Q86U06	439 aa	Known RBP	4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	LCA5	Q86VQ0	697 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	CPXCR1	Q8N123	301 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	NKAIN3	Q8N8D7	197 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	SLC44A5	Q8NCS7	719 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	MVB12A	Q96EY5	273 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	MPP4	Q96JB8	637 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	SELENOO	Q9BVL4	669 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	PIH1D1	Q9NWS0	290 aa	Known RBP	4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	ICAM5	Q9UMF0	924 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	STXBP5L	Q9Y2K9	1186 aa		4.07	□□□□□ -1.76
ABCD3-206	ENST00000493416	WASHC2C	Q9Y4E1	1318 aa		4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416		A0A0G2JK05	382 aa		4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	CD3EAP	O15446	510 aa	Known RBP	4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	RASAL1	O95294	804 aa		4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	ACAA1	P09110	424 aa	Predicted RBP	4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	RHCE	P18577	417 aa		4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	HOXA7	P31268	230 aa	Predicted RBP	4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	ANP32A	P39687	249 aa	Known RBP	4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	HTR3A	P46098	478 aa		4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	E2F5	Q15329	346 aa		4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	ANO1	Q5XXA6	986 aa		4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	CFAP161	Q6P656	301 aa		4.06	□□□□□ -1.76
ABCD3-206	ENST00000493416	ZNF783	Q6ZMS7	281 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms