RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ARMC6Q6NXE6 501 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 BAP1Q92560 729 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 FAM136AQ96C01 138 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 RAB3IPQ96QF0 476 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 CLPBQ9H078 707 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 ISCUQ9H1K1 167 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 SFMBT1Q9UHJ3 866 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 L1RE1Q9UN81 338 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 BTAF1O14981 1849 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 MATKP42679 507 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 BCL2L1Q07817 233 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 POU6F1Q14863 301 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 CCNJLQ8IV13 435 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 ACTRT1Q8TDG2 376 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 PXYLP1Q8TE99 480 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 BRD9Q9H8M2 597 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 SPEF2Q9C093 1822 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 SYN3O14994 580 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 NYAP1Q6ZVC0 841 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 FBXO25Q8TCJ0 367 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 TM6SF2Q9BZW4 377 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 OSGEPL1Q9H4B0 414 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 CD274Q9NZQ7 290 aa14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 TRMT6Q9UJA5 497 aaKnown RBP14.79□□□□□ -0.04
ARHGEF39-205ENST00000490638 LUC7L3O95232 432 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 GJA5P36382 358 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 SLC29A2Q14542 456 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 INTS6LQ5JSJ4 861 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 TAPT1Q6NXT6 567 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 ERAP2Q6P179 960 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 LCLAT1Q6UWP7 414 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 NT5DC3Q86UY8 548 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 PDCD7Q8N8D1 485 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 SNRNP25Q9BV90 132 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 VCX3BQ9H321 246 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 NWD2Q9ULI1 1742 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 TMEM247A6NEH6 219 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 RNF103O00237 685 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 CILPO75339 1184 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 NR2C2P49116 596 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 TRIM32Q13049 653 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 PAPD7Q5XG87 772 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 TNS4Q8IZW8 715 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 ATP6V1G3Q96LB4 118 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 BRD8Q9H0E9 1235 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 TBC1D13Q9NVG8 400 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 PLK2Q9NYY3 685 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 MYBPHLA2RUH7 354 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 SRP72O76094 671 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 MAP3K10Q02779 954 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 RBBP7Q16576 425 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 FBXL19Q6PCT2 694 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 SPATS2Q86XZ4 545 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 PHF13Q86YI8 300 aaPredicted RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 TDRD5Q8NAT2 981 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 SGF29Q96ES7 293 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 ACBD6Q9BR61 282 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 FAM96AQ9H5X1 160 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 CASS4Q9NQ75 786 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 NCKAP1Q9Y2A7 1128 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 MYO7AQ13402 2215 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 DNM1LO00429 736 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 CCL16O15467 120 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 TPH1P17752 444 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 KDELR1P24390 212 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 CNKSR3Q6P9H4 555 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 PRSS55Q6UWB4 352 aaPredicted RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 MAMDC4Q6UXC1 1216 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 CHPFQ8IZ52 775 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 OR2W6PQ8NHA6 318 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 LNX1Q8TBB1 728 aaPredicted RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 PPWD1Q96BP3 646 aaKnown RBP14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 KLHL29Q96CT2 875 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 TLR10Q9BXR5 811 aa14.78□□□□□ -0.04
ARHGEF39-205ENST00000490638 PRPF4O43172 522 aaKnown RBP eCLIP14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 ANP32DO95626 131 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 ADSSP30520 456 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 ATP13A4Q4VNC1 1196 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 TRHDEQ9UKU6 1024 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 STXBP5LQ9Y2K9 1186 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 GSTA4O15217 222 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 OPHN1O60890 802 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 MORF4L2Q15014 288 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 CST9Q5W186 159 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 GET4Q7L5D6 327 aaPredicted RBP14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 RD3Q7Z3Z2 195 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 TMEM192Q8IY95 271 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 RUBCNQ92622 972 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 STK39Q9UEW8 545 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 PCDHGB4Q9UN71 923 aa14.77□□□□□ -0.04
ARHGEF39-205ENST00000490638 FGF10O15520 208 aaPredicted RBP14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 KDM1AO60341 852 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 TBL1XO60907 577 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 CAND2O75155 1236 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 C8AP07357 584 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 HSPA8P11142 646 aaKnown RBP14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 PCK1P35558 622 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 MMP13P45452 471 aa14.77□□□□□ -0.05
ARHGEF39-205ENST00000490638 LIG3P49916 1009 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms