RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TRIM38O00635 465 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 SIGLEC6O43699 453 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 SDC3O75056 442 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 CSO75390 466 aaKnown RBP14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 KLKB1P03952 638 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 C7P10643 843 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 DDIT3P35638 169 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 SKOR1P84550 965 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 TLE1Q04724 770 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 KCNJ12Q14500 433 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 EIF4HQ15056 248 aaKnown RBP14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 ZSCAN23Q3MJ62 389 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 ARL13BQ3SXY8 428 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 NCEH1Q6PIU2 408 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 PAQR9Q6ZVX9 377 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 ZNF720Q7Z2F6 126 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 FAM35AQ86V20 835 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 CYB5D2Q8WUJ1 264 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 DEPDC7Q96QD5 511 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 MED10Q9BTT4 135 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 TMEM245Q9H330 911 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 CYLDQ9NQC7 956 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 PRSS16Q9NQE7 514 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 TLR8Q9NR97 1041 aaKnown RBP14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 HSPBP1Q9NZL4 362 aa14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 COL27A1Q8IZC6 1860 aaPredicted RBP14.39□□□□□ -0.11
EXOSC3-207ENST00000490516 A0A1W2PNU3 283 aaPredicted RBP14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 VWA3AA6NCI4 1184 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 A8MXQ7 604 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 TLR4O00206 839 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 OPA1O60313 960 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 TACC1O75410 805 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 STC2O76061 302 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 RXRGP48443 463 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 GALCP54803 685 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 NXPH1P58417 271 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 DAB2P98082 770 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 ZBTB16Q05516 673 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 SERINC3Q13530 473 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 E2F5Q15329 346 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 TTC31Q49AM3 519 aaPredicted RBP14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 C3orf38Q5JPI3 329 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 HIST2H2BCQ6DN03 193 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 SPATS2Q86XZ4 545 aaKnown RBP14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 CCDC83Q8IWF9 413 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 FBXO18Q8NFZ0 1043 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 GANCQ8TET4 914 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 EXTL1Q92935 676 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 PCIF1Q9H4Z3 704 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 DMAP1Q9NPF5 467 aaPredicted RBP14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 BLOC1S4Q9NUP1 217 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 COMMD8Q9NX08 183 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 SERGEFQ9UGK8 458 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 SEPT3Q9UH03 358 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 SATB2Q9UPW6 733 aa14.38□□□□□ -0.11
EXOSC3-207ENST00000490516 ENO4A6NNW6 628 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 EFSO43281 561 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 PPP1R37O75864 691 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 BEST1O76090 585 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 LDHAP00338 332 aaKnown RBP14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 TNNC2P02585 160 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 PLA2G4AP47712 749 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 CLN3Q13286 438 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 SFR1Q86XK3 245 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 ZMIZ2Q8NF64 920 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 ARHGAP9Q9BRR9 750 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 CBWD1Q9BRT8 395 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 OSBPL2Q9H1P3 480 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 MAN2B2Q9Y2E5 1009 aa14.37□□□□□ -0.11
EXOSC3-207ENST00000490516 CYP26A1O43174 497 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 TIMM44O43615 452 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 AP1G2O75843 785 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 CST3P01034 146 aaPredicted RBP14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 FAM87AP0C7U9 286 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 RBMS1P29558 406 aaKnown RBP14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 TMC6Q7Z403 805 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 HVCN1Q96D96 273 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 SERAC1Q96JX3 654 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 SLC46A1Q96NT5 459 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 PSMG3-AS1Q96PY0 264 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 SMOQ99835 787 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 STRA6Q9BX79 667 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 MTG2Q9H4K7 406 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 ERVMER34-1Q9H9K5 563 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 NMUR1Q9HB89 426 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 KRT82Q9NSB4 513 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 WDR70Q9NW82 654 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 NCKAP1Q9Y2A7 1128 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 ATP8B3O60423 1300 aa14.36□□□□□ -0.11
EXOSC3-207ENST00000490516 A0A1B0GVM2 712 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 PMS2P1A4D2B8 440 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 CLEC18AA5D8T8 446 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 KRT38O76015 456 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 PRPF6O94906 941 aaKnown RBP14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 HMBSP08397 361 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 RARGP13631 454 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 GARTP22102 1010 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 CHKAP35790 457 aa14.35□□□□□ -0.11
EXOSC3-207ENST00000490516 ZNF211Q13398 564 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms