RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PROSER1Q86XN7 944 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 FAM217AQ8IXS0 508 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 TTC39CQ8N584 583 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 ANKRD52Q8NB46 1076 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 NDRG1Q92597 394 aaKnown RBP16.61■□□□□ 0.25
PLOD3-216ENST00000489927 PLD4Q96BZ4 506 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 EEF2KMTQ96G04 330 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 FAXDC2Q96IV6 333 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 SPATA32Q96LK8 384 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 NUP58Q9BVL2 599 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 SLC2A11Q9BYW1 496 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 RAB20Q9NX57 234 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 PCOLCE2Q9UKZ9 415 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 LHX6Q9UPM6 363 aa16.61■□□□□ 0.25
PLOD3-216ENST00000489927 FAM237AA0A1B0GTK4 181 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 TULP2O00295 520 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 BCAT2O15382 392 aaPredicted RBP16.6■□□□□ 0.25
PLOD3-216ENST00000489927 ZBED1O96006 694 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 ACADMP11310 421 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 HLA-EP13747 358 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 MXI1P50539 228 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 BNC1Q01954 994 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 SCAPQ12770 1279 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 E2F5Q15329 346 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 PM20D1Q6GTS8 502 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 BHLHA9Q7RTU4 235 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 FAM124AQ86V42 546 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 FBXL13Q8NEE6 735 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 TATDN2Q93075 761 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 ULBP1Q9BZM6 244 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 GAREM1Q9H706 876 aa16.6■□□□□ 0.25
PLOD3-216ENST00000489927 EIF2B4Q9UI10 523 aaKnown RBP16.6■□□□□ 0.25
PLOD3-216ENST00000489927 TIMM44O43615 452 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 TSPAN3O60637 253 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 HOXD9P28356 352 aaPredicted RBP16.59■□□□□ 0.25
PLOD3-216ENST00000489927 HLA-FP30511 346 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 SLC8A3P57103 927 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 ARID5AQ03989 594 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 TRIP4Q15650 581 aaPredicted RBP16.59■□□□□ 0.25
PLOD3-216ENST00000489927 HLA-BQ31612 363 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 MPPE1Q53F39 396 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 GLRX5Q86SX6 157 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 SLCO6A1Q86UG4 719 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 FMNL3Q8IVF7 1028 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 C1orf216Q8TAB5 229 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 SETD7Q8WTS6 366 aaKnown RBP16.59■□□□□ 0.25
PLOD3-216ENST00000489927 TM7SF3Q9NS93 570 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 FNDC3AQ9Y2H6 1198 aaKnown RBP16.59■□□□□ 0.25
PLOD3-216ENST00000489927 ATRXP46100 2492 aa16.59■□□□□ 0.25
PLOD3-216ENST00000489927 CELSR3Q9NYQ7 3312 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 CER1O95813 267 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 ZNF883P0CG24 379 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 MATKP42679 507 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 HARS2P49590 506 aaKnown RBP16.58■□□□□ 0.24
PLOD3-216ENST00000489927 PDE4CQ08493 712 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 CAMK2GQ13555 558 aaPredicted RBP16.58■□□□□ 0.24
PLOD3-216ENST00000489927 GOLGA7BQ2TAP0 167 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 EDRF1Q3B7T1 1238 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 CCNI2Q6ZMN8 369 aaPredicted RBP16.58■□□□□ 0.24
PLOD3-216ENST00000489927 KRBA2Q6ZNG9 492 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 SMYD4Q8IYR2 804 aaPredicted RBP16.58■□□□□ 0.24
PLOD3-216ENST00000489927 OR2T3Q8NH03 318 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 OLA1Q9NTK5 396 aaKnown RBP16.58■□□□□ 0.24
PLOD3-216ENST00000489927 SFMBT1Q9UHJ3 866 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 TSPAN16Q9UKR8 245 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 APOBEC2Q9Y235 224 aaKnown RBP16.58■□□□□ 0.24
PLOD3-216ENST00000489927 SLCO1B1Q9Y6L6 691 aa16.58■□□□□ 0.24
PLOD3-216ENST00000489927 CKAP5Q14008 2032 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 A0A1B0GVT2 93 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 XPO1O14980 1071 aaKnown RBP16.57■□□□□ 0.24
PLOD3-216ENST00000489927 ACSL1P33121 698 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 KRT85P78386 507 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 ADIGQ0VDE8 80 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 IL27RAQ6UWB1 636 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 ZNF366Q8N895 744 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 BAHD1Q8TBE0 780 aaPredicted RBP16.57■□□□□ 0.24
PLOD3-216ENST00000489927 CYB5D2Q8WUJ1 264 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 SNX19Q92543 992 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 EDEM1Q92611 657 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 LHX5Q9H2C1 402 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 TMEM245Q9H330 911 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 GOLPH3LQ9H4A5 285 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 C6orf106Q9H6K1 298 aaPredicted RBP16.57■□□□□ 0.24
PLOD3-216ENST00000489927 STOML2Q9UJZ1 356 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 HBS1LQ9Y450 684 aaKnown RBP16.57■□□□□ 0.24
PLOD3-216ENST00000489927 BAHCC1Q9P281 2608 aa16.57■□□□□ 0.24
PLOD3-216ENST00000489927 ANKRD11Q6UB99 2663 aaPredicted RBP16.56■□□□□ 0.24
PLOD3-216ENST00000489927 YJEFN3A6XGL0 299 aa16.56■□□□□ 0.24
PLOD3-216ENST00000489927 E7ENQ6 273 aa16.56■□□□□ 0.24
PLOD3-216ENST00000489927 STX10O60499 249 aa16.56■□□□□ 0.24
PLOD3-216ENST00000489927 EPB41P11171 864 aaKnown RBP16.56■□□□□ 0.24
PLOD3-216ENST00000489927 CSNK1EP49674 416 aaKnown RBP16.56■□□□□ 0.24
PLOD3-216ENST00000489927 AFF3P51826 1226 aaKnown RBP16.56■□□□□ 0.24
PLOD3-216ENST00000489927 BCAT1P54687 386 aa16.56■□□□□ 0.24
PLOD3-216ENST00000489927 PTPRNQ16849 979 aa16.56■□□□□ 0.24
PLOD3-216ENST00000489927 CBWD6Q4V339 395 aa16.56■□□□□ 0.24
PLOD3-216ENST00000489927 FNDC3BQ53EP0 1204 aaKnown RBP16.56■□□□□ 0.24
PLOD3-216ENST00000489927 CBWD3Q5JTY5 395 aa16.56■□□□□ 0.24
PLOD3-216ENST00000489927 CBWD5Q5RIA9 395 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms