RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 GOLGA8RI6L899 631 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ATP2A1O14983 1001 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 CLOCKO15516 846 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 FOXD2O60548 495 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 LRRN2O75325 713 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 GCATO75600 419 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 MICAL2O94851 1124 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ATE1O95260 518 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 FTLP02792 175 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 MT-ND3P03897 115 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 FYNP06241 537 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 SNRPA1P09661 255 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 XRCC5P13010 732 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 SNRPBP14678 240 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 VEGFAP15692 232 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 RRM1P23921 792 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 DCKP27707 260 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 NMT1P30419 496 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ADSLP30566 484 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 IFNA8P32881 189 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 GNL1P36915 607 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 IL6STP40189 918 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ETV4P43268 484 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 NDST2P52849 883 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 COPAP53621 1224 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 IST1P53990 364 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 EPHB1P54762 984 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ALDH18A1P54886 795 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ARHGAP8P85298 464 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 CDKL1Q00532 357 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 PDIA2Q13087 525 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 MESDQ14696 234 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 PDK1Q15118 436 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 CAVIN4Q5BKX8 364 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 RALGPS1Q5JS13 557 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 SDE2Q6IQ49 451 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 NEK10Q6ZWH5 1172 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 HAUS6Q7Z4H7 955 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF354CQ86Y25 554 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 SIX6OS1Q8N1H7 587 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 LSMEM1Q8N8F7 131 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 NGDNQ8NEJ9 315 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 EXD1Q8NHP7 514 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 SNIP1Q8TAD8 396 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ATP2A3Q93084 1043 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF486Q96H40 463 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ALPK1Q96QP1 1244 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 YME1L1Q96TA2 773 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 NAP1L4Q99733 375 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 AGPAT1Q99943 283 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 DCUN1D5Q9BTE7 237 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 DHRS4Q9BTZ2 278 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 OSBPL11Q9BXB4 747 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 FRMD8Q9BZ67 464 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 HOXD1Q9GZZ0 328 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 RNF38Q9H0F5 515 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 SNX25Q9H3E2 840 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 RPAP3Q9H6T3 665 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 CAAP1Q9H8G2 361 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 VPS37BQ9H9H4 285 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 CXorf21Q9HAI6 301 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 C12orf10Q9HB07 376 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ZFYVE28Q9HCC9 887 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 XAB2Q9HCS7 855 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 NEUROD4Q9HD90 331 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ATP13A2Q9NQ11 1180 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 THAP1Q9NVV9 213 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 MKS1Q9NXB0 559 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 CNTN3Q9P232 1028 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 DAPK2Q9UIK4 370 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 AJAP1Q9UKB5 411 aaPredicted RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 PCDHA2Q9Y5H9 948 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 MRPL42Q9Y6G3 142 aaKnown RBP4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 ZNF536O15090 1300 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 PXDNQ92626 1479 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 PKD1L3Q7Z443 1732 aa4.91□□□□□ -1.62
SNRNP40-206ENST00000489853 UTRNP46939 3433 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ESYT2A0FGR8 921 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 H3BMQ9 156 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 J3QRK9 145 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ACOX3O15254 700 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC16A3O15427 465 aaKnown RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CLDN3O15551 220 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 PRKAB2O43741 272 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 SCO2O43819 266 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 NUAK1O60285 661 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 KLHL41O60662 606 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 LPXNO60711 386 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 SPAG6O75602 509 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ADAMTS2O95450 1211 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 PROCP04070 461 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 DLATP10515 647 aaKnown RBP4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 MCF2P10911 925 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 BGNP21810 368 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ENPP1P22413 925 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 NR2F2P24468 414 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 CXCR2P25025 360 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 GABRB3P28472 473 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 ADSSP30520 456 aa4.9□□□□□ -1.62
SNRNP40-206ENST00000489853 PEX3P56589 373 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms