RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ZNF518BQ9C0D4 1074 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 KCND2Q9NZV8 630 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 FBXO10Q9UK96 956 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 SPTBN1Q01082 2364 aaKnown RBP9.7□□□□□ -0.86
SSBP1-212ENST00000489378 DOPEY1Q5JWR5 2465 aa9.7□□□□□ -0.86
SSBP1-212ENST00000489378 UTP20O75691 2785 aaKnown RBP9.69□□□□□ -0.86
SSBP1-212ENST00000489378 K7ENP7 123 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 CLDN5O00501 218 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 CAPN5O15484 640 aaPredicted RBP9.69□□□□□ -0.86
SSBP1-212ENST00000489378 TBX18O95935 607 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 MT-CO3P00414 261 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 WNT1P04628 370 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 TUBP50607 506 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 ZNF131P52739 623 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 MFAP3P55082 362 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 CDH8P55286 799 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 RBP5P82980 135 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 GTF2BQ00403 316 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 ILKQ13418 452 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 ZNF234Q14588 700 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 ME3Q16798 604 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 HYIQ5T013 277 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 SNX30Q5VWJ9 437 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 SLFN12LQ6IEE8 588 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 INO80CQ6PI98 192 aaPredicted RBP9.69□□□□□ -0.86
SSBP1-212ENST00000489378 NUP93Q8N1F7 819 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 ZNF511Q8NB15 262 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 OVCA2Q8WZ82 227 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 POMGNT1Q8WZA1 660 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 FAM213AQ9BRX8 229 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 KLF16Q9BXK1 252 aaPredicted RBP9.69□□□□□ -0.86
SSBP1-212ENST00000489378 ACE2Q9BYF1 805 aaPredicted RBP9.69□□□□□ -0.86
SSBP1-212ENST00000489378 NACA2Q9H009 215 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 LHX5Q9H2C1 402 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 STK17AQ9UEE5 414 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 ITGA11Q9UKX5 1188 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 ODF2LQ9ULJ1 636 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 SLC27A6Q9Y2P4 619 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 WASF2Q9Y6W5 498 aa9.69□□□□□ -0.86
SSBP1-212ENST00000489378 NPC1O15118 1278 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 FAM13AO94988 1023 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 IGHV4-34P06331 123 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 EPHX1P07099 455 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 ZDHHC11BP0C7U3 371 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 MYF5P13349 255 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 CKMT2P17540 419 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 SCP2P22307 547 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 WARSP23381 471 aaKnown RBP9.68□□□□□ -0.86
SSBP1-212ENST00000489378 EPHA8P29322 1005 aaPredicted RBP9.68□□□□□ -0.86
SSBP1-212ENST00000489378 TOB1P50616 345 aaPredicted RBP9.68□□□□□ -0.86
SSBP1-212ENST00000489378 BCAT1P54687 386 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 GABREP78334 506 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 BNIP3Q12983 259 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 ATG14Q6ZNE5 492 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 BRSK2Q8IWQ3 736 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 RBBP8NLQ8NC74 664 aaPredicted RBP9.68□□□□□ -0.86
SSBP1-212ENST00000489378 CACTINQ8WUQ7 758 aaKnown RBP9.68□□□□□ -0.86
SSBP1-212ENST00000489378 SAAL1Q96ER3 474 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 VCPIP1Q96JH7 1222 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 KCNK16Q96T55 309 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 MRPL45Q9BRJ2 306 aaKnown RBP9.68□□□□□ -0.86
SSBP1-212ENST00000489378 B3GNT5Q9BYG0 378 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 MTMR12Q9C0I1 747 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 FOXP1Q9H334 677 aaPredicted RBP9.68□□□□□ -0.86
SSBP1-212ENST00000489378 DPEP3Q9H4B8 488 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 ZHX3Q9H4I2 956 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 PARVGQ9HBI0 331 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 ASCL3Q9NQ33 180 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 ADAMTS1Q9UHI8 967 aa9.68□□□□□ -0.86
SSBP1-212ENST00000489378 WNT9AO14904 365 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 SUV39H1O43463 412 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 TLR5O60602 858 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 RTN3O95197 1032 aaPredicted RBP9.67□□□□□ -0.86
SSBP1-212ENST00000489378 TRAPPC10P48553 1259 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 RACK1P63244 317 aaKnown RBP9.67□□□□□ -0.86
SSBP1-212ENST00000489378 UBAP2LQ14157 1087 aaKnown RBP9.67□□□□□ -0.86
SSBP1-212ENST00000489378 TMEM119Q4V9L6 283 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 SFMBT2Q5VUG0 894 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 LYPD8Q6UX82 237 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 KANSL1Q7Z3B3 1105 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 GPBP1Q86WP2 473 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 PARP9Q8IXQ6 854 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 OR2T3Q8NH03 318 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 HPDLQ96IR7 371 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 PIWIL1Q96J94 861 aaKnown RBP9.67□□□□□ -0.86
SSBP1-212ENST00000489378 DPH1Q9BZG8 443 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 ELOVL4Q9GZR5 314 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 BTBD1Q9H0C5 482 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 EBF2Q9HAK2 575 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.67□□□□□ -0.863e-8■■■■■ 34.9
SSBP1-212ENST00000489378 KCNK4Q9NYG8 393 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 CLEC4EQ9ULY5 219 aa9.67□□□□□ -0.86
SSBP1-212ENST00000489378 CFAP99D6REC4 459 aa9.66□□□□□ -0.86
SSBP1-212ENST00000489378 USP12O75317 370 aa9.66□□□□□ -0.86
SSBP1-212ENST00000489378 PENKP01210 267 aaPredicted RBP9.66□□□□□ -0.86
SSBP1-212ENST00000489378 PTPN1P18031 435 aaKnown RBP9.66□□□□□ -0.86
SSBP1-212ENST00000489378 CR2P20023 1033 aa9.66□□□□□ -0.86
SSBP1-212ENST00000489378 ACP1P24666 158 aa9.66□□□□□ -0.86
SSBP1-212ENST00000489378 GNL1P36915 607 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms