RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ERBB2P04626 1255 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 MMEP08473 750 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 SLC2A3P11169 496 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 CDH5P33151 784 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-218ENST00000489037 KIR2DL1P43626 348 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-218ENST00000489037 JAM2P57087 298 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 DMWDQ09019 674 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 SIM2Q14190 667 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-218ENST00000489037 PTPN20Q4JDL3 420 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 EMC10Q5UCC4 262 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 SYPL2Q5VXT5 272 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 TRIM72Q6ZMU5 477 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 PRR23BQ6ZRT6 265 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 TAC4Q86UU9 113 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 DEFB106AQ8N104 65 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 ATP6V0D2Q8N8Y2 350 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 ZNF557Q8N988 423 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-218ENST00000489037 ADAM32Q8TC27 787 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 EPS8L1Q8TE68 723 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 FUCA2Q9BTY2 467 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 EPC1Q9H2F5 836 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
BRCA1-218ENST00000489037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.85□□□□□ -0.03
BRCA1-218ENST00000489037 RRN3Q9NYV6 651 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 NCDNQ9UBB6 729 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 TJP2Q9UDY2 1190 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 FBXO10Q9UK96 956 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 SLC27A6Q9Y2P4 619 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 STARD13Q9Y3M8 1113 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 SDK1Q7Z5N4 2213 aa14.85□□□□□ -0.03
BRCA1-218ENST00000489037 TRIM24O15164 1050 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 GRAP2O75791 330 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 MOCS2O96007 188 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-218ENST00000489037 CISD3P0C7P0 127 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 ABCB4P21439 1286 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 NTSR1P30989 418 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 NOS2P35228 1153 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 PXNP49023 591 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-218ENST00000489037 CDR2Q01850 454 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 ARID5AQ03989 594 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 MESP2Q0VG99 397 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 MTA1Q13330 715 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 TAF5Q15542 800 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 CRY1Q16526 586 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 OLFML1Q6UWY5 402 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 SLC26A9Q7LBE3 791 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 APTXQ7Z2E3 356 aaKnown RBP14.84□□□□□ -0.03
BRCA1-218ENST00000489037 ANKS1BQ7Z6G8 1248 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 CHPFQ8IZ52 775 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 IL17RCQ8NAC3 791 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 ZNF397Q8NF99 534 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-218ENST00000489037 DDX1Q92499 740 aaKnown RBP14.84□□□□□ -0.03
BRCA1-218ENST00000489037 RUBCNQ92622 972 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 FCRL2Q96LA5 508 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-218ENST00000489037 SLC2A13Q96QE2 648 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 TMEM51Q9NW97 253 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 DDIT4Q9NX09 232 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 GMEB2Q9UKD1 530 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 STAP1Q9ULZ2 295 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 SMG5Q9UPR3 1016 aaKnown RBP14.84□□□□□ -0.03
BRCA1-218ENST00000489037 EML5Q05BV3 1969 aa14.84□□□□□ -0.03
BRCA1-218ENST00000489037 EP300Q09472 2414 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 SYNJ2BP-COX16A0A087WUM0 186 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 NPC1O15118 1278 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 EPHB6O15197 1021 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 TIMM44O43615 452 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 DAB1O75553 588 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 RPP40O75818 363 aaKnown RBP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 SCNN1AP37088 669 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 GABRB2P47870 512 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 RNASE9P60153 205 aaKnown RBP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 IQCB1Q15051 598 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 MPP7Q5T2T1 576 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 FAM102AQ5T9C2 384 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 NAA35Q5VZE5 725 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 SND1Q7KZF4 910 aaKnown RBP eCLIP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 SFTPA1Q8IWL2 248 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 PGBD3Q8N328 593 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 SUMF1Q8NBK3 374 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 HJURPQ8NCD3 748 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 GAB3Q8WWW8 586 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 CPA5Q8WXQ8 436 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 SLC39A13Q96H72 371 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 PIWIL1Q96J94 861 aaKnown RBP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 BTN2A3PQ96KV6 586 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 CBX8Q9HC52 389 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 SEPT11Q9NVA2 429 aaKnown RBP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 POLR3BQ9NW08 1133 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 COX16Q9P0S2 106 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 BCCIPQ9P287 314 aaKnown RBP eCLIP14.83□□□□□ -0.04
BRCA1-218ENST00000489037 EBF1Q9UH73 591 aa14.83□□□□□ -0.04
BRCA1-218ENST00000489037 GOLGA6L7A0A1B0GV03 622 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 SGK1O00141 431 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 TEX33O43247 280 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 HRO43593 1189 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 TBL1XO60907 577 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 HOXB2P14652 356 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 FERP16591 822 aa14.82□□□□□ -0.04
BRCA1-218ENST00000489037 CCR1P32246 355 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms