RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 MRPL1Q9BYD6 325 aaKnown RBP14.66□□□□□ -0.06
RER1-207ENST00000488353 FRMD8P1Q9BZ68 369 aaPredicted RBP14.66□□□□□ -0.06
RER1-207ENST00000488353 CISHQ9NSE2 258 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 THAP1Q9NVV9 213 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 APOBEC2Q9Y235 224 aaKnown RBP14.66□□□□□ -0.06
RER1-207ENST00000488353 SF3B1O75533 1304 aaKnown RBP eCLIP14.66□□□□□ -0.061e-6■■■■■ 68.1
RER1-207ENST00000488353 KBTBD13C9JR72 458 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 MAGEB3O15480 346 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 SUPT3HO75486 399 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 SORBS2O94875 1100 aaKnown RBP14.66□□□□□ -0.06
RER1-207ENST00000488353 YBX3P16989 372 aaKnown RBP eCLIP14.66□□□□□ -0.068e-8■■□□□ 11.7
RER1-207ENST00000488353 EDNRBP24530 442 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 TCF7P36402 384 aaPredicted RBP14.66□□□□□ -0.06
RER1-207ENST00000488353 ARL2P36404 184 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 ZNF132P52740 706 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 YWHAGP61981 247 aaKnown RBP eCLIP14.66□□□□□ -0.06
RER1-207ENST00000488353 MRPS5P82675 430 aaKnown RBP14.66□□□□□ -0.06
RER1-207ENST00000488353 STX3Q13277 289 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 USP41Q3LFD5 358 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 C9orf131Q5VYM1 1079 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 LRRC8BQ6P9F7 803 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 ERO1BQ86YB8 467 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 IGDCC3Q8IVU1 814 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 FBXW8Q8N3Y1 598 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 POU5F2Q8N7G0 328 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 TMEM35BQ8NCS4 154 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 ACTL9Q8TC94 416 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 RSPH1Q8WYR4 309 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 USP6NLQ92738 828 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 CDCA5Q96FF9 252 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 ZNF668Q96K58 619 aaPredicted RBP14.66□□□□□ -0.06
RER1-207ENST00000488353 C20orf27Q9GZN8 174 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 PSMD13Q9UNM6 376 aa14.66□□□□□ -0.06
RER1-207ENST00000488353 ADGRA2Q96PE1 1338 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 TCRBV5S1A1TA0A578 114 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 E9PBE3 544 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 CYB561D2O14569 222 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 BIRC5O15392 142 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 SRGAP2CP0DJJ0 459 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 SRGAP2BP0DMP2 458 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 RFC1P35251 1148 aaPredicted RBP14.65□□□□□ -0.06
RER1-207ENST00000488353 PHEXP78562 749 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 OTUD4Q01804 1114 aaKnown RBP14.65□□□□□ -0.06
RER1-207ENST00000488353 MPP3Q13368 585 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 CAPSQ13938 189 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 SYCP2LQ5T4T6 812 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 PQLC1Q8N2U9 271 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 BBS5Q8N3I7 341 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 CMTM5Q96DZ9 223 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 PRPF18Q99633 342 aaKnown RBP14.65□□□□□ -0.06
RER1-207ENST00000488353 SLC13A1Q9BZW2 595 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 FAIMQ9NVQ4 179 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 ZNF180Q9UJW8 692 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 IGKV6D-21A0A0A0MT36 114 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 ASS1P00966 412 aaKnown RBP14.65□□□□□ -0.06
RER1-207ENST00000488353 STAT5BP51692 787 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 NRLP54845 237 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 OSTNP61366 133 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 ORC1Q13415 861 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 LPIN1Q14693 890 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 RARS2Q5T160 578 aaKnown RBP14.65□□□□□ -0.06
RER1-207ENST00000488353 DENND5BQ6ZUT9 1274 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 ARCQ7LC44 396 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 HPS6Q86YV9 775 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 ANKRD13AQ8IZ07 590 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 DEFB107AQ8IZN7 70 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 TMEM130Q8N3G9 435 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 CATSPER1Q8NEC5 780 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 JOSD2Q8TAC2 188 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 PIWIL2Q8TC59 973 aaKnown RBP14.65□□□□□ -0.06
RER1-207ENST00000488353 CYP4F11Q9HBI6 524 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 XAB2Q9HCS7 855 aaKnown RBP14.65□□□□□ -0.06
RER1-207ENST00000488353 MKS1Q9NXB0 559 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 PADI4Q9UM07 663 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 EFR3BQ9Y2G0 817 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 AP4B1Q9Y6B7 739 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 TEX264Q9Y6I9 313 aa14.65□□□□□ -0.06
RER1-207ENST00000488353 PAPPA2Q9BXP8 1791 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 CST8O60676 142 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 CRTAMO95727 393 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 PIGRP01833 764 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 BPGMP07738 259 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 FAM58BPP0C7Q3 252 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 IDO1P14902 403 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 CDH2P19022 906 aaPredicted RBP14.64□□□□□ -0.07
RER1-207ENST00000488353 ACAT1P24752 427 aaKnown RBP14.64□□□□□ -0.07
RER1-207ENST00000488353 PSMA2P25787 234 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 BASP1P80723 227 aaKnown RBP14.64□□□□□ -0.07
RER1-207ENST00000488353 TFAMQ00059 246 aaKnown RBP14.64□□□□□ -0.07
RER1-207ENST00000488353 MYBPC1Q00872 1141 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 TUBB3Q13509 450 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 APOFQ13790 326 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 PIGHQ14442 188 aaPredicted RBP14.64□□□□□ -0.07
RER1-207ENST00000488353 HSDL1Q3SXM5 330 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 TCHHL1Q5QJ38 904 aaPredicted RBP14.64□□□□□ -0.07
RER1-207ENST00000488353 DENND1BQ6P3S1 775 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 CTAGE3PQ8IX95 158 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 UBR7Q8N806 425 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 SMYD1Q8NB12 490 aa14.64□□□□□ -0.07
RER1-207ENST00000488353 HSPBAP1Q96EW2 488 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms