RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 CYTH4Q9UIA0 394 aa11.71□□□□□ -0.53
RAB11FIP3-210ENST00000487899 STON1Q9Y6Q2 735 aa11.71□□□□□ -0.53
RAB11FIP3-210ENST00000487899 BECN2A8MW95 431 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 KRT37O76014 449 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 LATS1O95835 1130 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 LTFP02788 710 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 PRKCHP24723 683 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 HLA-FP30511 346 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 SLC6A4P31645 630 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 GPD2P43304 727 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 CETN1Q12798 172 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 EIF4HQ15056 248 aaKnown RBP11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 CAMK4Q16566 473 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 MEA1Q16626 185 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 FUT11Q495W5 492 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 SPDYCQ5MJ68 293 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 IL31Q6EBC2 164 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 GJB7Q6PEY0 223 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 PGBD3Q8N328 593 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 EHBP1Q8NDI1 1231 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 RNF139Q8WU17 664 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 SORCS1Q8WY21 1168 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 PIGKQ92643 395 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 MKRN2Q9H000 416 aaKnown RBP11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 THAP10Q9P2Z0 257 aaPredicted RBP11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 EVLQ9UI08 416 aaPredicted RBP11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 RWDD2AQ9UIY3 292 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 AJAP1Q9UKB5 411 aaPredicted RBP11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 PILRBQ9UKJ0 227 aa11.7□□□□□ -0.54
RAB11FIP3-210ENST00000487899 CHD5Q8TDI0 1954 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 CDX4O14627 284 aaPredicted RBP11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 ITPKAP23677 461 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 RPL6Q02878 288 aaKnown RBP11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 ZNF234Q14588 700 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 ADGRF1Q5T601 910 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 LYSMD4Q5XG99 296 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 DENND1BQ6P3S1 775 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 SYT12Q8IV01 421 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 SLC41A1Q8IVJ1 513 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 DDI1Q8WTU0 396 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 DDX1Q92499 740 aaKnown RBP11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 MYEOVQ96EZ4 313 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 FCRL2Q96LA5 508 aaPredicted RBP11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 HSFY1Q96LI6 401 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 CRACR2AQ9BSW2 395 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 LSM14BQ9BX40 385 aaKnown RBP11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 SIX2Q9NPC8 291 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 USP36Q9P275 1121 aaKnown RBP11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 TJP2Q9UDY2 1190 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 CYP8B1Q9UNU6 501 aa11.69□□□□□ -0.54
RAB11FIP3-210ENST00000487899 PCNX2A6NKB5 2137 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 C4orf47A7E2U8 309 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 KCNJ18B7U540 433 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 KHNYNO15037 678 aaKnown RBP11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 AP5Z1O43299 807 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 TSPAN3O60637 253 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 FBXO21O94952 628 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 CYBBP04839 570 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 NCAM1P13591 858 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 KRT5P13647 590 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 SLC9A1P19634 815 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 HOXD12P35452 270 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 HARS2P49590 506 aaKnown RBP11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 COPAP53621 1224 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 ZNF445P59923 1031 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 IRX4P78413 519 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 RING1Q06587 406 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 NNTQ13423 1086 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 BYSLQ13895 437 aaKnown RBP11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 DPCR1Q3MIW9 517 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 MPPE1Q53F39 396 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 TRIM61Q5EBN2 209 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 NUGGCQ68CJ6 796 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 NADSYN1Q6IA69 706 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 KIAA0907Q7Z7F0 614 aaPredicted RBP11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 TAC4Q86UU9 113 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 CACUL1Q86Y37 369 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 DQX1Q8TE96 717 aaKnown RBP11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 SHC3Q92529 594 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 HSPA12BQ96MM6 686 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 SLC2A11Q9BYW1 496 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 MIS12Q9H081 205 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 CLSTN2Q9H4D0 955 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 TMEM9BQ9NQ34 198 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 FSCN3Q9NQT6 498 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 ELOVL2Q9NXB9 296 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 APEX2Q9UBZ4 518 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 DMXL2Q8TDJ6 3036 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 PTPRBP23467 1997 aa11.68□□□□□ -0.54
RAB11FIP3-210ENST00000487899 DOCK9Q9BZ29 2069 aa11.67□□□□□ -0.54
RAB11FIP3-210ENST00000487899 GTPBP10A4D1E9 387 aaKnown RBP11.67□□□□□ -0.54
RAB11FIP3-210ENST00000487899 E5RJQ4 531 aa11.67□□□□□ -0.54
RAB11FIP3-210ENST00000487899 NPC1O15118 1278 aa11.67□□□□□ -0.54
RAB11FIP3-210ENST00000487899 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
RAB11FIP3-210ENST00000487899 MAP3K13O43283 966 aa11.67□□□□□ -0.54
RAB11FIP3-210ENST00000487899 ZNF217O75362 1048 aa11.67□□□□□ -0.54
RAB11FIP3-210ENST00000487899 IGLV3-19P01714 112 aa11.67□□□□□ -0.54
RAB11FIP3-210ENST00000487899 IGLV3-25P01717 112 aa11.67□□□□□ -0.54
RAB11FIP3-210ENST00000487899 C7P10643 843 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms