RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	COBLL1	Q53SF7	1204 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	SLC41A1	Q8IVJ1	513 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	RGL4	Q8IZJ4	473 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	HDDC3	Q8N4P3	179 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	PLD4	Q96BZ4	506 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	GTPBP2	Q9BX10	602 aa	Known RBP	13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	ULBP1	Q9BZM6	244 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	CD93	Q9NPY3	652 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	CACNA2D2	Q9NY47	1150 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	TSPAN16	Q9UKR8	245 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	CYP8B1	Q9UNU6	501 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	NEUROG3	Q9Y4Z2	214 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	RAD54B	Q9Y620	910 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	BPTF	Q12830	3046 aa		13.87	□□□□□ -0.19
UBA3-210	ENST00000485424	TRIM49B	A6NDI0	452 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	NPC1	O15118	1278 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	SYNCRIP	O60506	623 aa	Known RBP	13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	VDR	P11473	427 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	SIM1	P81133	766 aa	Predicted RBP	13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	GFPT1	Q06210	699 aa	Predicted RBP	13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	PDE4C	Q08493	712 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	ADIG	Q0VDE8	80 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	SYCP2L	Q5T4T6	812 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	ISM2	Q6H9L7	571 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	MINDY1	Q8N5J2	469 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	OR2I1P	Q8NGU4	316 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	GOLGA1	Q92805	767 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	ERCC4	Q92889	916 aa	Predicted RBP	13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	HSPA12B	Q96MM6	686 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	TIGD1	Q96MW7	591 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	NT5C1B	Q96P26	610 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	GABRG3	Q99928	467 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	KLK13	Q9UKR3	277 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	AGO1	Q9UL18	857 aa	Known RBP	13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	KIAA1257	Q9ULG3	409 aa		13.86	□□□□□ -0.19
UBA3-210	ENST00000485424	SRRM3	A6NNA2	597 aa	Predicted RBP	13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	OPHN1	O60890	802 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	CISD3	P0C7P0	127 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	SETSIP	P0DME0	302 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	LCP1	P13796	627 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	RAB41	Q5JT25	222 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	KLHL10	Q6JEL2	608 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	TMEM270	Q6UE05	265 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	ANKS1B	Q7Z6G8	1248 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	CPXM2	Q8N436	756 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	UBA3	Q8TBC4	463 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	P2RY11	Q96G91	374 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	CEP63	Q96MT8	703 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	CIPC	Q9C0C6	399 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	SLC6A17	Q9H1V8	727 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	SLC27A6	Q9Y2P4	619 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	COQ4	Q9Y3A0	265 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	PCDHB4	Q9Y5E5	795 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	STON1	Q9Y6Q2	735 aa		13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	GCN1	Q92616	2671 aa	Known RBP	13.85	□□□□□ -0.19
UBA3-210	ENST00000485424	BICDL2	A1A5D9	508 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	WASH3P	C4AMC7	463 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	ARHGAP33	O14559	1287 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	PENK	P01210	267 aa	Predicted RBP	13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	KLKB1	P03952	638 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	SYP	P08247	313 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	ACADM	P11310	421 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	GNS	P15586	552 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	FMO5	P49326	533 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	ZNF132	P52740	706 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	PMS1	P54277	932 aa	Known RBP	13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	MFAP3	P55082	362 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	ZNF445	P59923	1031 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	MCCD1	P59942	119 aa	Predicted RBP	13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	FAM193A	P78312	1265 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	MPPE1	Q53F39	396 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	FYB2	Q5VWT5	728 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	PM20D1	Q6GTS8	502 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	FMNL3	Q8IVF7	1028 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	PPM1K	Q8N3J5	372 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	TRIML1	Q8N9V2	468 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	FOXJ1	Q92949	421 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	SLC35C1	Q96A29	364 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	MRGPRX1	Q96LB2	322 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	SLC2A11	Q9BYW1	496 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	PRDM16	Q9HAZ2	1276 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	ABCC13	Q9NSE7	274 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	SUSD2	Q9UGT4	822 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	MSRB2	Q9Y3D2	182 aa		13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	HBS1L	Q9Y450	684 aa	Known RBP	13.84	□□□□□ -0.19
UBA3-210	ENST00000485424	MEI4	A8MW99	385 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424		M0QYV0	167 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	GJB3	O75712	270 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	PAEP	P09466	180 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	CD59	P13987	128 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	RDX	P35241	583 aa	Known RBP	13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	EIF4H	Q15056	248 aa	Known RBP	13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	STIL	Q15468	1287 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	GEN1	Q17RS7	908 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	WDR45B	Q5MNZ6	344 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	BSPRY	Q5W0U4	402 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	SERPINA13P	Q6UXR4	307 aa		13.83	□□□□□ -0.2
UBA3-210	ENST00000485424	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.83	□□□□□ -0.2

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