RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 NAP1L5Q96NT1 182 aaPredicted RBP23.04■■□□□ 1.28
CNTNAP3B-208ENST00000484254 IRX2Q9BZI1 471 aaPredicted RBP23.04■■□□□ 1.28
CNTNAP3B-208ENST00000484254 MMP17Q9ULZ9 603 aa23.04■■□□□ 1.28
CNTNAP3B-208ENST00000484254 STARD13Q9Y3M8 1113 aa23.04■■□□□ 1.28
CNTNAP3B-208ENST00000484254 PIEZO1Q92508 2521 aa23.04■■□□□ 1.28
CNTNAP3B-208ENST00000484254 VPS13AQ96RL7 3174 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 GFRA3O60609 400 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 TSPAN3O60637 253 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 DAB1O75553 588 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 GRAP2O75791 330 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 SERPINC1P01008 464 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 CYP1A1P04798 512 aaPredicted RBP23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 SCNN1AP37088 669 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 PITX1P78337 314 aaPredicted RBP23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 EIF4EBP2Q13542 120 aaPredicted RBP23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 NAA35Q5VZE5 725 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 HEATR6Q6AI08 1181 aaKnown RBP23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 ASCL5Q7RTU5 278 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 WDR5BQ86VZ2 330 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 CCDC33Q8N5R6 958 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 ALLCQ8N6M5 410 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 IL17RCQ8NAC3 791 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 CPA5Q8WXQ8 436 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 SLC27A6Q9Y2P4 619 aa23.03■■□□□ 1.28
CNTNAP3B-208ENST00000484254 CCDC163A0A0D9SF12 145 aa23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 A0A1W2PQC6 194 aa23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 KLF8O95600 359 aaPredicted RBP23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 LMNAP02545 664 aaKnown RBP23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 NR1I3Q14994 352 aa23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 FAM133BQ5BKY9 247 aaKnown RBP23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 TRIM72Q6ZMU5 477 aa23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 XYLT1Q86Y38 959 aa23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 TMA16Q96EY4 203 aaKnown RBP23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 HHIPQ96QV1 700 aa23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 DDX50Q9BQ39 737 aaKnown RBP23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 SLC2A11Q9BYW1 496 aa23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 FAM204AQ9H8W3 233 aa23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 ZFHX2Q9C0A1 2572 aaPredicted RBP23.02■■□□□ 1.28
CNTNAP3B-208ENST00000484254 GOLGA6L7A0A1B0GV03 622 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 PRRT4C9JH25 899 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 GOLGA6L19H0YKK7 550 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 HOXD9P28356 352 aaPredicted RBP23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 SLC6A4P31645 630 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 GBP1P32455 592 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 NOS2P35228 1153 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 ARID5AQ03989 594 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 ZC3H12AQ5D1E8 599 aaKnown RBP23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 PIK3R6Q5UE93 754 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 NADSYN1Q6IA69 706 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 ZNF513Q8N8E2 541 aaPredicted RBP23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 TXNDC5Q8NBS9 432 aaKnown RBP23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 EPC1Q9H2F5 836 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 DDIT4Q9NX09 232 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 HCN2Q9UL51 889 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 CLEC4EQ9ULY5 219 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 MYO6Q9UM54 1294 aa23.01■■□□□ 1.27
CNTNAP3B-208ENST00000484254 FAM170AA1A519 330 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 APBB3O95704 486 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 APOEP02649 317 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 CCDC172P0C7W6 258 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 FERP16591 822 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 CNR2P34972 360 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 MATKP42679 507 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 FANCCQ00597 558 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 CRY1Q16526 586 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 EOGTQ5NDL2 527 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 MPP7Q5T2T1 576 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 RFWD3Q6PCD5 774 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 TRMT11Q7Z4G4 463 aaKnown RBP23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 SUMF1Q8NBK3 374 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 BAP1Q92560 729 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 RRN3Q9NYV6 651 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 MYO15AQ9UKN7 3530 aa23■■□□□ 1.27
CNTNAP3B-208ENST00000484254 SGK1O00141 431 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 ADAM23O75077 832 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 MOCS2O96007 188 aaPredicted RBP22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 SLC2A3P11169 496 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 MMP8P22894 467 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 PXNP49023 591 aaPredicted RBP22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 SGSHP51688 502 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 DGKEP52429 567 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 C2CD6Q53TS8 623 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 FAM102AQ5T9C2 384 aaPredicted RBP22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 RNF43Q68DV7 783 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 TSTD1Q8NFU3 115 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 BTN2A3PQ96KV6 586 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 PCDHB18PQ96TA0 734 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 NPY6RQ99463 290 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 ZDHHC4Q9NPG8 344 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 EBF1Q9UH73 591 aa22.99■■□□□ 1.27
CNTNAP3B-208ENST00000484254 KCNU1A8MYU2 1149 aa22.98■■□□□ 1.27
CNTNAP3B-208ENST00000484254 HRO43593 1189 aa22.98■■□□□ 1.27
CNTNAP3B-208ENST00000484254 UNGP13051 313 aaPredicted RBP22.98■■□□□ 1.27
CNTNAP3B-208ENST00000484254 RNASE9P60153 205 aaKnown RBP22.98■■□□□ 1.27
CNTNAP3B-208ENST00000484254 GEN1Q17RS7 908 aa22.98■■□□□ 1.27
CNTNAP3B-208ENST00000484254 EGFLAMQ63HQ2 1017 aa22.98■■□□□ 1.27
CNTNAP3B-208ENST00000484254 TMEM92Q6UXU6 159 aa22.98■■□□□ 1.27
CNTNAP3B-208ENST00000484254 MMS22LQ6ZRQ5 1243 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms