RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 IGHV1OR15-9A0A0B4J2B8 117 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 UPK3BL1B0FP48 263 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 UPK3BL2E5RIL1 263 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 TAF4O00268 1085 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 SH3BP5O60239 455 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 NDUFS2O75306 463 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 SYPP08247 313 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 NTSR1P30989 418 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 HOXD12P35452 270 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF165P49910 485 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 TPM4P67936 248 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 PLEKHG6Q3KR16 790 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 PREPLQ4J6C6 727 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-213ENST00000484112 PKDCCQ504Y2 493 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 KLHDC7AQ5VTJ3 777 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 PEAR1Q5VY43 1037 aaPredicted RBP10.47□□□□□ -0.73
CPSF4-213ENST00000484112 PM20D1Q6GTS8 502 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 RABEPKQ7Z6M1 372 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 PIGZQ86VD9 579 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 TMEM25Q86YD3 366 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 MIB1Q86YT6 1006 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 CHPFQ8IZ52 775 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 PHTF2Q8N3S3 785 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 PNPLA1Q8N8W4 532 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 SCAMP5Q8TAC9 235 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 STK32AQ8WU08 396 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 OTUB2Q96DC9 234 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 HSFY1Q96LI6 401 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 HSPA12BQ96MM6 686 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 CCSER2Q9H7U1 834 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 CAPN10Q9HC96 672 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 SIX2Q9NPC8 291 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 CYLDQ9NQC7 956 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 CNGB3Q9NQW8 809 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 SPHK2Q9NRA0 654 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 RAD54BQ9Y620 910 aa10.47□□□□□ -0.73
CPSF4-213ENST00000484112 HELZP42694 1942 aaKnown RBP10.46□□□□□ -0.73
CPSF4-213ENST00000484112 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 CHD6Q8TD26 2715 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 LGALS16A8MUM7 142 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 BECN2A8MW95 431 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 NEDD8-MDP1E9PL57 170 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 PES1O00541 588 aaKnown RBP10.46□□□□□ -0.73
CPSF4-213ENST00000484112 HOXC11O43248 304 aaPredicted RBP10.46□□□□□ -0.73
CPSF4-213ENST00000484112 SART1O43290 800 aaKnown RBP10.46□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF217O75362 1048 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 RALAP11233 206 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 KRT5P13647 590 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 CD59P13987 128 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 UCHL3P15374 230 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 MAOBP27338 520 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 COPB1P53618 953 aaKnown RBP10.46□□□□□ -0.73
CPSF4-213ENST00000484112 SNX16P57768 344 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 PTK2Q05397 1052 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 GOLGA8FQ08AF8 430 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 GOLGA8DPQ0D2H9 430 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 SCAPQ12770 1279 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 KCNMA1Q12791 1236 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 TRIP6Q15654 476 aaKnown RBP10.46□□□□□ -0.73
CPSF4-213ENST00000484112 ZNF423Q2M1K9 1284 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 GOLGA7BQ2TAP0 167 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 EGFLAMQ63HQ2 1017 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 GRAMD4Q6IC98 578 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 TPGS1Q6ZTW0 290 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 FMNL3Q8IVF7 1028 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 SLC41A1Q8IVJ1 513 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 ETFBKMTQ8IXQ9 262 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 TERB1Q8NA31 727 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 KCNV2Q8TDN2 545 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 IPO4Q8TEX9 1081 aaKnown RBP10.46□□□□□ -0.73
CPSF4-213ENST00000484112 SLC35F5Q8WV83 523 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 IRGQQ8WZA9 623 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 KAT5Q92993 513 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 WBP2Q969T9 261 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
CPSF4-213ENST00000484112 ACOX2Q99424 681 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 TRIM62Q9BVG3 475 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 SLC6A17Q9H1V8 727 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 LRRC4Q9HBW1 653 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 DNAJC17Q9NVM6 304 aaKnown RBP10.46□□□□□ -0.73
CPSF4-213ENST00000484112 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 GMIPQ9P107 970 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 DNAJC12Q9UKB3 198 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 HCN2Q9UL51 889 aa10.46□□□□□ -0.73
CPSF4-213ENST00000484112 ADAMTS9Q9P2N4 1935 aa10.46□□□□□ -0.74
CPSF4-213ENST00000484112 MYOFQ9NZM1 2061 aa10.46□□□□□ -0.74
CPSF4-213ENST00000484112 GON4LQ3T8J9 2241 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 A0A1W2PQF6 199 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 SYCE3A1L190 88 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 RNF225M0QZC1 329 aaPredicted RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 FBXO21O94952 628 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 ZBED1O96006 694 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 NDUFV2P19404 249 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 GNA15P30679 374 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 ATP5C1P36542 298 aaKnown RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 ACADSBP45954 432 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 RPL34P49207 117 aaKnown RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 PDE4CQ08493 712 aa10.45□□□□□ -0.74
CPSF4-213ENST00000484112 HNRNPDQ14103 355 aaKnown RBP10.45□□□□□ -0.74
CPSF4-213ENST00000484112 ZSCAN23Q3MJ62 389 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms