RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PCDHB9Q9Y5E1 797 aa14.56□□□□□ -0.08
VARS-226ENST00000483275 GCN1Q92616 2671 aaKnown RBP14.56□□□□□ -0.08
VARS-226ENST00000483275 GOLGA8CPA6NN73 597 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 MAPK13O15264 365 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 CALCAP01258 141 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 HOXD9P28356 352 aaPredicted RBP14.55□□□□□ -0.08
VARS-226ENST00000483275 CHKAP35790 457 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 PSMC2P35998 433 aaKnown RBP14.55□□□□□ -0.08
VARS-226ENST00000483275 COG7P83436 770 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 ADIGQ0VDE8 80 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 SCAPQ12770 1279 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 ADAM9Q13443 819 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 ENPP2Q13822 863 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 CBWD6Q4V339 395 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 ZCWPW2Q504Y3 356 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 FNDC3BQ53EP0 1204 aaKnown RBP14.55□□□□□ -0.08
VARS-226ENST00000483275 DCAF17Q5H9S7 520 aaPredicted RBP14.55□□□□□ -0.08
VARS-226ENST00000483275 CBWD3Q5JTY5 395 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 CBWD5Q5RIA9 395 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 ATL3Q6DD88 541 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 FMNL3Q8IVF7 1028 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 ZC3H3Q8IXZ2 948 aaKnown RBP14.55□□□□□ -0.08
VARS-226ENST00000483275 CCDC150Q8NCX0 1101 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 UCMAQ8WVF2 138 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 DNASE2BQ8WZ79 361 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 TMEM176AQ96HP8 235 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 C6orf106Q9H6K1 298 aaPredicted RBP14.55□□□□□ -0.08
VARS-226ENST00000483275 GAREM1Q9H706 876 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 SFMBT1Q9UHJ3 866 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 STRIP2Q9ULQ0 834 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 ZNF510Q9Y2H8 683 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 ZDHHC9Q9Y397 364 aa14.55□□□□□ -0.08
VARS-226ENST00000483275 A0A1B0GVT2 93 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 H0Y626 953 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 PIK3R2O00459 728 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 BCAT2O15382 392 aaPredicted RBP14.54□□□□□ -0.08
VARS-226ENST00000483275 CBFA2T3O75081 653 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 TRIM16O95361 564 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 ZBED1O96006 694 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 CYBBP04839 570 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 ACADMP11310 421 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 HLA-FP30511 346 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 ACSL1P33121 698 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 CSNK1EP49674 416 aaKnown RBP14.54□□□□□ -0.08
VARS-226ENST00000483275 PDE4CQ08493 712 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 NFIL3Q16649 462 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 RAB41Q5JT25 222 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 KRT39Q6A163 491 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 GUF1Q8N442 669 aaKnown RBP14.54□□□□□ -0.08
VARS-226ENST00000483275 FBXL13Q8NEE6 735 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 UBA3Q8TBC4 463 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 WFDC5Q8TCV5 224 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 CDK5RAP1Q96SZ6 601 aaKnown RBP14.54□□□□□ -0.08
VARS-226ENST00000483275 DCLK3Q9C098 648 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 MTG2Q9H4K7 406 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 GDPD2Q9HCC8 539 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 ABCB8Q9NUT2 735 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 USP25Q9UHP3 1055 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 TSPAN16Q9UKR8 245 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 PCOLCE2Q9UKZ9 415 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 BTBD3Q9Y2F9 522 aa14.54□□□□□ -0.08
VARS-226ENST00000483275 SMG1Q96Q15 3661 aaKnown RBP14.53□□□□□ -0.08
VARS-226ENST00000483275 YJEFN3A6XGL0 299 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 METTL12A8MUP2 240 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 E7ENQ6 273 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 KCNK3O14649 394 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 CAPNS1P04632 268 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 CD19P15391 556 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 ARID5AQ03989 594 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 LRMPQ12912 555 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 SLC14A1Q13336 389 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 TRIP4Q15650 581 aaPredicted RBP14.53□□□□□ -0.08
VARS-226ENST00000483275 HLA-BQ31612 363 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 CCDC157Q569K6 752 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 TCERG1LQ5VWI1 586 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 ARHGAP17Q68EM7 881 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 RFWD3Q6PCD5 774 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 LRSAM1Q6UWE0 723 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 KRBA2Q6ZNG9 492 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 METTL3Q86U44 580 aaKnown RBP14.53□□□□□ -0.08
VARS-226ENST00000483275 PROSER1Q86XN7 944 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 FAM217AQ8IXS0 508 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 CPXM2Q8N436 756 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 ZNF276Q8N554 614 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 ANKRD52Q8NB46 1076 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 MDM1Q8TC05 714 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 ADAMTS14Q8WXS8 1223 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 CCDC47Q96A33 483 aaKnown RBP14.53□□□□□ -0.08
VARS-226ENST00000483275 PLD4Q96BZ4 506 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 RAB20Q9NX57 234 aa14.53□□□□□ -0.08
VARS-226ENST00000483275 FAM221BA6H8Z2 402 aa14.52□□□□□ -0.09
VARS-226ENST00000483275 IGLV3-19P01714 112 aa14.52□□□□□ -0.09
VARS-226ENST00000483275 MYL1P05976 194 aa14.52□□□□□ -0.09
VARS-226ENST00000483275 ATXN1LP0C7T5 689 aaKnown RBP14.52□□□□□ -0.09
VARS-226ENST00000483275 LCP1P13796 627 aa14.52□□□□□ -0.09
VARS-226ENST00000483275 RPL13P26373 211 aaKnown RBP14.52□□□□□ -0.09
VARS-226ENST00000483275 RDXP35241 583 aaKnown RBP14.52□□□□□ -0.09
VARS-226ENST00000483275 MATKP42679 507 aa14.52□□□□□ -0.09
VARS-226ENST00000483275 RGS7P49802 495 aa14.52□□□□□ -0.09
VARS-226ENST00000483275 IL9RQ01113 521 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms