RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 SCD5Q86SK9 330 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 ERICH1Q86X53 443 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 TMEM176AQ96HP8 235 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 SLC6A18Q96N87 628 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 ELF4Q99607 663 aaPredicted RBP18.19■□□□□ 0.5
HMGN1-212ENST00000479586 ACE2Q9BYF1 805 aaPredicted RBP18.19■□□□□ 0.5
HMGN1-212ENST00000479586 RASAL2Q9UJF2 1139 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 NAGPAQ9UK23 515 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 AGO1Q9UL18 857 aaKnown RBP18.19■□□□□ 0.5
HMGN1-212ENST00000479586 ZNF510Q9Y2H8 683 aa18.19■□□□□ 0.5
HMGN1-212ENST00000479586 ITGAVP06756 1048 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 FAM200BP0CF97 657 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 C7P10643 843 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 CDK4P11802 303 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 ABCB4P21439 1286 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 TXLNAP40222 546 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 NDST1P52848 882 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 RPS14P62263 151 aaKnown RBP18.18■□□□□ 0.5
HMGN1-212ENST00000479586 BIRC3Q13489 604 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 FNDC3BQ53EP0 1204 aaKnown RBP18.18■□□□□ 0.5
HMGN1-212ENST00000479586 CCDC73Q6ZRK6 1079 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 EID2Q8N6I1 236 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 PLEKHO2Q8TD55 490 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 SAP25Q8TEE9 199 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 CYB5D2Q8WUJ1 264 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 TSC1Q92574 1164 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 SEMA4CQ9C0C4 833 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 TMEM245Q9H330 911 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 CLMPQ9H6B4 373 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 PCDHA5Q9Y5H7 936 aa18.18■□□□□ 0.5
HMGN1-212ENST00000479586 TIMM44O43615 452 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 DNTTP04053 509 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 WNT1P04628 370 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 CYBBP04839 570 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 RACK1P63244 317 aaKnown RBP18.17■□□□□ 0.5
HMGN1-212ENST00000479586 BMT2Q1RMZ1 405 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 KIAA0895LQ68EN5 471 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 EPM2AIP1Q7L775 607 aaPredicted RBP18.17■□□□□ 0.5
HMGN1-212ENST00000479586 DENND1CQ8IV53 801 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 FMNL3Q8IVF7 1028 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 CRYBG2Q8N1P7 616 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 XXYLT1Q8NBI6 393 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 DDI1Q8WTU0 396 aa18.17■□□□□ 0.5
HMGN1-212ENST00000479586 SRPRBQ9Y5M8 271 aaKnown RBP18.17■□□□□ 0.5
HMGN1-212ENST00000479586 EIF3DO15371 548 aaKnown RBP eCLIP18.16■□□□□ 0.5
HMGN1-212ENST00000479586 ARHGAP6O43182 974 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 EFEMP1Q12805 493 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 KCNH2Q12809 1159 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 NCOA4Q13772 614 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 TBC1D25Q3MII6 688 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 TADA2BQ86TJ2 420 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 FAM181AQ8N9Y4 354 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 TMX3Q96JJ7 454 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 SLC2A11Q9BYW1 496 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 DCLK3Q9C098 648 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 SGK2Q9HBY8 427 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 PRSS16Q9NQE7 514 aa18.16■□□□□ 0.5
HMGN1-212ENST00000479586 PTPN13Q12923 2485 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 A0A1W2PPC4 97 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 FAM47DPA6NHR8 397 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 VNN1O95497 513 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 ACTN2P35609 894 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 KIF11P52732 1056 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 COG7P83436 770 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 ZBTB16Q05516 673 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 TTC31Q49AM3 519 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-212ENST00000479586 NELFCDQ8IXH7 590 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 CPXM2Q8N436 756 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 ZNF507Q8TCN5 953 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 NAF1Q96HR8 494 aaKnown RBP18.15■□□□□ 0.5
HMGN1-212ENST00000479586 LGMNQ99538 433 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 EBF2Q9HAK2 575 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 PIEZO2Q9H5I5 2752 aa18.15■□□□□ 0.5
HMGN1-212ENST00000479586 ARID1BQ8NFD5 2236 aaPredicted RBP18.14■□□□□ 0.49
HMGN1-212ENST00000479586 RALAP11233 206 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 GLDCP23378 1020 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 HOXD9P28356 352 aaPredicted RBP18.14■□□□□ 0.49
HMGN1-212ENST00000479586 EPHA8P29322 1005 aaPredicted RBP18.14■□□□□ 0.49
HMGN1-212ENST00000479586 HLA-FP30511 346 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 CCDC186Q7Z3E2 898 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 ZC3H3Q8IXZ2 948 aaKnown RBP18.14■□□□□ 0.49
HMGN1-212ENST00000479586 ZNF276Q8N554 614 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 PDILTQ8N807 584 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 TWNKQ96RR1 684 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 HNRNPABQ99729 332 aaKnown RBP18.14■□□□□ 0.49
HMGN1-212ENST00000479586 ARID3AQ99856 593 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 CPNE5Q9HCH3 593 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 PNPLA8Q9NP80 782 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 CLIC5Q9NZA1 410 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 PLA2G4CQ9UP65 541 aa18.14■□□□□ 0.49
HMGN1-212ENST00000479586 LRRIQ3A6PVS8 624 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-212ENST00000479586 WNT9AO14904 365 aa18.13■□□□□ 0.49
HMGN1-212ENST00000479586 PSEN1P49768 467 aa18.13■□□□□ 0.49
HMGN1-212ENST00000479586 RHDQ02161 417 aa18.13■□□□□ 0.49
HMGN1-212ENST00000479586 LY6DQ14210 128 aa18.13■□□□□ 0.49
HMGN1-212ENST00000479586 ARHGAP40Q5TG30 622 aa18.13■□□□□ 0.49
HMGN1-212ENST00000479586 ZNF776Q68DI1 518 aaPredicted RBP18.13■□□□□ 0.49
HMGN1-212ENST00000479586 CHST9Q7L1S5 443 aa18.13■□□□□ 0.49
HMGN1-212ENST00000479586 UNC93AQ86WB7 457 aa18.13■□□□□ 0.49
HMGN1-212ENST00000479586 FAM217AQ8IXS0 508 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms