RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 USP29Q9HBJ7 922 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 XAB2Q9HCS7 855 aaKnown RBP13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 VCX3AQ9NNX9 186 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 GPATCH2LQ9NWQ4 482 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 PACSIN3Q9UKS6 424 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 COMMD3-BMI1R4GMX3 469 aa13.75□□□□□ -0.21
PDZRN3-208ENST00000479530 A0A087WZ62 844 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 TXNDC9O14530 226 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 VTNP04004 478 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 APRTP07741 180 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 TGFB3P10600 412 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 TAP1Q03518 808 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 GRM1Q13255 1194 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 HADHQ16836 314 aaKnown RBP13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 CDO1Q16878 200 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 ZNF667Q5HYK9 610 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 CCDC33Q8N5R6 958 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 CMASQ8NFW8 434 aaPredicted RBP13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 FDXACB1Q9BRP7 624 aaPredicted RBP13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 RPF1Q9H9Y2 349 aaKnown RBP13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 PNPLA8Q9NP80 782 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 DNAJC16Q9Y2G8 782 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 SLC4A7Q9Y6M7 1214 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 LOC100653049A0A140TA62 436 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 H7C0C1 242 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 M0QYV0 167 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 KRT34O76011 436 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 VAV1P15498 845 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 KCNA4P22459 653 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 ARRB2P32121 409 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 ATP5OP48047 213 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 RGS7P49802 495 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 RPL10AP62906 217 aaKnown RBP13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 PTPN11Q06124 597 aaPredicted RBP13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 GRM2Q14416 872 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 TRIP10Q15642 601 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 MMEL1Q495T6 779 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 UNC5AQ6ZN44 842 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 CYP4V2Q6ZWL3 525 aaPredicted RBP13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 STKLD1Q8NE28 680 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 BCO2Q9BYV7 579 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 KLHL4Q9C0H6 718 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 PREBQ9HCU5 417 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 USP18Q9UMW8 372 aa13.74□□□□□ -0.21
PDZRN3-208ENST00000479530 SLC15A5A6NIM6 579 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 KCNN4O15554 427 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 PRKCHP24723 683 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 POLR2BP30876 1174 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 GPD2P43304 727 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 WASHC5Q12768 1159 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 PDK3Q15120 406 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 NOMO1Q15155 1222 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 SLC10A6Q3KNW5 377 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 FASTKD1Q53R41 847 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 ADGRG6Q86SQ4 1221 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 HEXIM2Q96MH2 286 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 FRMD8P1Q9BZ68 369 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 CDH22Q9UJ99 828 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 CHADO15335 359 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 SIN3BO75182 1162 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 TRUB2O95900 331 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 RAG1P15918 1043 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 RBL1P28749 1068 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 SERPINB6P35237 376 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 GRIA1P42261 906 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 CDH6P55285 790 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 FAM102AQ5T9C2 384 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 AAGABQ6PD74 315 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 UGT2A3Q6UWM9 527 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 TRIM42Q8IWZ5 723 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 OLFM3Q96PB7 478 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 GCNAQ96QF7 691 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 LHX5Q9H2C1 402 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 ZNF180Q9UJW8 692 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 HEY1Q9Y5J3 304 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 SIP14410 1827 aa13.73□□□□□ -0.21
PDZRN3-208ENST00000479530 CAPN8A6NHC0 703 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 HCRTO43612 131 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 CREB3O43889 395 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 CCNT2O60583 730 aaKnown RBP13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 CILPO75339 1184 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 SPAG6O75602 509 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 APOEP02649 317 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 INSRRP14616 1297 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 OSBPP22059 807 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 ADORA2AP29274 412 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 AMHR2Q16671 573 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 TEDDM1Q5T9Z0 273 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 PGM2L1Q6PCE3 622 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 TMEM176AQ96HP8 235 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 MPP4Q96JB8 637 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 FAM167AQ96KS9 214 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 CCDC28BQ9BUN5 200 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 PNPOQ9NVS9 261 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 THAP1Q9NVV9 213 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 IL1RAPL1Q9NZN1 696 aa13.72□□□□□ -0.21
PDZRN3-208ENST00000479530 EMCNQ9ULC0 261 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms