RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 FLRT2O43155 660 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 TIMM44O43615 452 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 F13A1P00488 732 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 HMBSP08397 361 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 ATXN1LP0C7T5 689 aaKnown RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 PDIA4P13667 645 aaKnown RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 HOXD9P28356 352 aaPredicted RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 HLA-FP30511 346 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 TRIP4Q15650 581 aaPredicted RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 COL28A1Q2UY09 1125 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 FOXD4L5Q5VV16 416 aaPredicted RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 ATL3Q6DD88 541 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 PM20D1Q6GTS8 502 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 INTS8Q75QN2 995 aaKnown RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 KIAA0907Q7Z7F0 614 aaPredicted RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 PDZD3Q86UT5 571 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 PIGZQ86VD9 579 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 SLC4A11Q8NBS3 891 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 FOXD4L4Q8WXT5 416 aaPredicted RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 SEMA4DQ92854 862 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 FAXDC2Q96IV6 333 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 OSGEPQ9NPF4 335 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 STOML2Q9UJZ1 356 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 RCOR1Q9UKL0 485 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 HPSEQ9Y251 543 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 BTBD3Q9Y2F9 522 aa13.38□□□□□ -0.27
TDP2-204ENST00000478507 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 TP53BP1Q12888 1972 aaPredicted RBP13.38□□□□□ -0.27
TDP2-204ENST00000478507 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
TDP2-204ENST00000478507 A0A1B0GVT2 93 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 MYL1P05976 194 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 EPHX1P07099 455 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 HLA-EP13747 358 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 NR2F2P24468 414 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 ACSL1P33121 698 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 CSNK1EP49674 416 aaKnown RBP13.37□□□□□ -0.27
TDP2-204ENST00000478507 AFF3P51826 1226 aaKnown RBP13.37□□□□□ -0.27
TDP2-204ENST00000478507 RAD23BP54727 409 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 YWHAGP61981 247 aaKnown RBP eCLIP13.37□□□□□ -0.27
TDP2-204ENST00000478507 PDE4CQ08493 712 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 CAMK2BQ13554 666 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 E2F5Q15329 346 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 PTPRNQ16849 979 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 FOXD4L6Q3SYB3 417 aaPredicted RBP13.37□□□□□ -0.27
TDP2-204ENST00000478507 ZCWPW2Q504Y3 356 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 ZNF394Q53GI3 561 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 ARHGAP17Q68EM7 881 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 SERPINA13PQ6UXR4 307 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 FOXD4L3Q6VB84 417 aaPredicted RBP13.37□□□□□ -0.27
TDP2-204ENST00000478507 CACUL1Q86Y37 369 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 ARHGAP18Q8N392 663 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.37□□□□□ -0.27
TDP2-204ENST00000478507 OR2T3Q8NH03 318 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 SETD7Q8WTS6 366 aaKnown RBP13.37□□□□□ -0.27
TDP2-204ENST00000478507 PLD4Q96BZ4 506 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 CDC6Q99741 560 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 ARID3AQ99856 593 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 ORAI3Q9BRQ5 295 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 CIPCQ9C0C6 399 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 C6orf106Q9H6K1 298 aaPredicted RBP13.37□□□□□ -0.27
TDP2-204ENST00000478507 TMEM8AQ9HCN3 771 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 SCUBE2Q9NQ36 999 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 RAXQ9Y2V3 346 aa13.37□□□□□ -0.27
TDP2-204ENST00000478507 SLC12A8A0AV02 714 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 CALUO43852 315 aaPredicted RBP13.36□□□□□ -0.27
TDP2-204ENST00000478507 RHOBTB3O94955 611 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 KIF20AO95235 890 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 CYBBP04839 570 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 ACADMP11310 421 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 PFKFB1P16118 471 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 GTF2H1P32780 548 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 PKP1Q13835 747 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 KIF19Q2TAC6 998 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 ADIPOR2Q86V24 386 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 FAM124AQ86V42 546 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 ZC3H3Q8IXZ2 948 aaKnown RBP13.36□□□□□ -0.27
TDP2-204ENST00000478507 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 DDI1Q8WTU0 396 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 TMEM176AQ96HP8 235 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 HEXIM2Q96MH2 286 aaKnown RBP13.36□□□□□ -0.27
TDP2-204ENST00000478507 CISHQ9NSE2 258 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 USP25Q9UHP3 1055 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 STRIP2Q9ULQ0 834 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 SNX11Q9Y5W9 270 aa13.36□□□□□ -0.27
TDP2-204ENST00000478507 COL5A1P20908 1838 aaPredicted RBP13.36□□□□□ -0.27
TDP2-204ENST00000478507 C10orf142B7Z368 130 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 TULP2O00295 520 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 PAPSS1O43252 624 aaPredicted RBP13.35□□□□□ -0.27
TDP2-204ENST00000478507 PCDHGA12O60330 932 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 TSPAN3O60637 253 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 ZBED1O96006 694 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 PRR29P0C7W0 189 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 CMA1P23946 247 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 GRIA4P48058 902 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 TKTL1P51854 596 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 DNM1Q05193 864 aaKnown RBP13.35□□□□□ -0.27
TDP2-204ENST00000478507 SMAD1Q15797 465 aaKnown RBP13.35□□□□□ -0.27
TDP2-204ENST00000478507 MPPE1Q53F39 396 aa13.35□□□□□ -0.27
TDP2-204ENST00000478507 KCNT1Q5JUK3 1230 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms