RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 MLXIPQ9HAP2 919 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 SLC38A10Q9HBR0 1119 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 AGPAT5Q9NUQ2 364 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 HOXC10Q9NYD6 342 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 GMIPQ9P107 970 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 CEP72Q9P209 647 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ARHGAP20Q9P2F6 1191 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 GNPTGQ9UJJ9 305 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ZFP69BQ9UJL9 534 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 CCPG1Q9ULG6 757 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 RAB26Q9ULW5 256 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 TRAF3IP3Q9Y228 551 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ITM2BQ9Y287 266 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 MTO1Q9Y2Z2 717 aaKnown RBP4.91□□□□□ -1.62
PTCD3-212ENST00000477520 PCDHB14Q9Y5E9 798 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 SLC30A1Q9Y6M5 507 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 ADGRA3Q8IWK6 1321 aa4.91□□□□□ -1.62
PTCD3-212ENST00000477520 LAMA4Q16363 1823 aa4.9□□□□□ -1.62
PTCD3-212ENST00000477520 MYH7BA7E2Y1 1941 aa4.9□□□□□ -1.62
PTCD3-212ENST00000477520 MYH7P12883 1935 aa4.9□□□□□ -1.62
PTCD3-212ENST00000477520 DDX60Q8IY21 1712 aaKnown RBP4.9□□□□□ -1.62
PTCD3-212ENST00000477520 ESYT3A0FGR9 886 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 TMEM120BA0PK00 339 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 DYTNA2CJ06 578 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 SYCE1LA8MT33 242 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 MIF4GDA9UHW6 222 aaKnown RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 TMEM114B3SHH9 223 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 KCNK3O14649 394 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 XPO1O14980 1071 aaKnown RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 MCF2LO15068 1137 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 PFDN6O15212 129 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 ALOX15BO15296 676 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 PRPF4O43172 522 aaKnown RBP eCLIP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 DAPK3O43293 454 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 RIPK2O43353 540 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 CDH16O75309 829 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 TBX10O75333 385 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 SPAG7O75391 227 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 APOEP02649 317 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 SHBGP04278 402 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 C8BP07358 591 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 NCAM1P13591 858 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 ANPEPP15144 967 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 RPL17P18621 184 aaKnown RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 GNAT2P19087 354 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 TACR1P25103 407 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 CDC25AP30304 524 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 CXCR5P32302 372 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 ACVRL1P37023 503 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 CCNFP41002 786 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 PRCPP42785 496 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 CDK9P50750 372 aaKnown RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 BCAP31P51572 246 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 HNRNPFP52597 415 aaKnown RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 ARFIP2P53365 341 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 COG7P83436 770 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 ATP2C1P98194 919 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 DR1Q01658 176 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 POU5F1Q01860 360 aaKnown RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 DNAJC3Q13217 504 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 GRAPQ13588 217 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 MOGSQ13724 837 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 KRT81Q14533 505 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 SLC29A2Q14542 456 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 STAT4Q14765 748 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 KYNUQ16719 465 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 TNNI3KQ59H18 835 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 KIAA1755Q5JYT7 1200 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 SNAP47Q5SQN1 464 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 BICRALQ6AI39 1079 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 OTUD7BQ6GQQ9 843 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 SNRNP48Q6IEG0 339 aaKnown RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 DUS1LQ6P1R4 473 aaKnown RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 CNNM4Q6P4Q7 775 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 KLHL35Q6PF15 583 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 APOA5Q6Q788 366 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 LDHAL6AQ6ZMR3 332 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 CYB5R4Q7L1T6 521 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 HAUS6Q7Z4H7 955 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 B3GNT8Q7Z7M8 397 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 RASSF3Q86WH2 238 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 PDSS2Q86YH6 399 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 RELL1Q8IUW5 271 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 TTLL6Q8N841 843 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 ARL10Q8N8L6 244 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 SPERTQ8NA61 448 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 OR6Y1Q8NGX8 325 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 OR2W6PQ8NHA6 318 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 GRAPLQ8TC17 118 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 GIMAP1Q8WWP7 306 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 ATL1Q8WXF7 558 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 ZNF75CPQ92670 426 aaPredicted RBP4.9□□□□□ -1.63
PTCD3-212ENST00000477520 ESR2Q92731 530 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 P2RX5Q93086 422 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 MTMR8Q96EF0 704 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 KAZALD1Q96I82 304 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 EPSTI1Q96J88 318 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 MS4A14Q96JA4 679 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 NSMCE3Q96MG7 304 aa4.9□□□□□ -1.63
PTCD3-212ENST00000477520 PRPF18Q99633 342 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms