RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TOR4AQ9NXH8 423 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 MARCH2Q9P0N8 246 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 CGNQ9P2M7 1197 aaKnown RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 AGO1Q9UL18 857 aaKnown RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 PLA2G4CQ9UP65 541 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 ANKRD6Q9Y2G4 727 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 FRMD4BQ9Y2L6 1034 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 SLC27A6Q9Y2P4 619 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 NFE2L3Q9Y4A8 694 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 TDRD6O60522 2096 aaKnown RBP7□□□□□ -1.29
RTFDC1-206ENST00000477485 LAMA5O15230 3695 aa7□□□□□ -1.29
RTFDC1-206ENST00000477485 KNL1Q8NG31 2342 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 HHLA1C9JL84 531 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 H0Y8X5 98 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 CUTAO60888 179 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 PENKP01210 267 aaPredicted RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 KLKB1P03952 638 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 NR3C1P04150 777 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 RPN1P04843 607 aaKnown RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 TRIM49P0CI25 452 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 TRIM49CP0CI26 452 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 JUPP14923 745 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 ABCB4P21439 1286 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 ME1P48163 572 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 BCAT1P54687 386 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 SLC8A3P57103 927 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 YWHAGP61981 247 aaKnown RBP eCLIP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 CUL4BQ13620 913 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 EIF4HQ15056 248 aaKnown RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 PRAMEF14Q5SWL7 426 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 C6orf118Q5T5N4 469 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 PPP1R26Q5T8A7 1209 aaPredicted RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 ERICH6BQ5W0A0 696 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 KLHDC10Q6PID8 442 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 SV2AQ7L0J3 742 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 CHST9Q7L1S5 443 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 CCDC186Q7Z3E2 898 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 SCD5Q86SK9 330 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 GATAD2AQ86YP4 633 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 GRAMD1CQ8IYS0 662 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 CRYBG2Q8N1P7 616 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 TAF4BQ92750 862 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 BIRC7Q96CA5 298 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 NXPE2Q96DL1 559 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 P2RY11Q96G91 374 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 PIWIL1Q96J94 861 aaKnown RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 HEXIM2Q96MH2 286 aaKnown RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 UBL7Q96S82 380 aaPredicted RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 HNRNPABQ99729 332 aaKnown RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 ACE2Q9BYF1 805 aaPredicted RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 ZSCAN16Q9H4T2 348 aaPredicted RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 ABCB8Q9NUT2 735 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 FAM13BQ9NYF5 915 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 CLEC4EQ9ULY5 219 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 NCKAP1Q9Y2A7 1128 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 PCDHGB2Q9Y5G2 931 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 DOCK9Q9BZ29 2069 aa6.99□□□□□ -1.29
RTFDC1-206ENST00000477485 CBX4O00257 560 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 ENC1O14682 589 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 RRP8O43159 456 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 CALUO43852 315 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 RNASEH1O60930 286 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 PPP6R2O75170 966 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 ASS1P00966 412 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 ITGAVP06756 1048 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 KRT13P13646 458 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 POLR2EP19388 210 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 ITPKBP27987 946 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 GRIA4P48058 902 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 GCLMP48507 274 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 NASPP49321 788 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 HARS2P49590 506 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 VAMP7P51809 220 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 KIF11P52732 1056 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 DNAJC3Q13217 504 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 CUL4AQ13619 759 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 ZACNQ401N2 412 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 KMT5BQ4FZB7 885 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 MPPE1Q53F39 396 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 TMEM215Q68D42 235 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 ZNF776Q68DI1 518 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 SHC4Q6S5L8 630 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 FMNL3Q8IVF7 1028 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 SCUBE3Q8IX30 993 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 C12orf56Q8IXR9 622 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 ARHGAP18Q8N392 663 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 EID2Q8N6I1 236 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 LINC00301Q8NCQ3 95 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 ADAM32Q8TC27 787 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 RNF139Q8WU17 664 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 SLC39A7Q92504 469 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 NDRG1Q92597 394 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 EDEM1Q92611 657 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 IGSF8Q969P0 613 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 SKA1Q96BD8 255 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 PLD4Q96BZ4 506 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 CNDP2Q96KP4 475 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 SLC6A18Q96N87 628 aa6.98□□□□□ -1.29
RTFDC1-206ENST00000477485 FCRL3Q96P31 734 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms