RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 CATSPER2Q96P56 530 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 GSDMAQ96QA5 445 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 NR1H4Q96RI1 486 aaPredicted RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 CTAGE1Q96RT6 745 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 NDNQ99608 321 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 SENP7Q9BQF6 1050 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 QTRT1Q9BXR0 403 aaKnown RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 RTFDC1Q9BY42 306 aaPredicted RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 NACAP1Q9BZK3 213 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 CCDC68Q9H2F9 335 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 NDUFA13Q9P0J0 144 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 SEPT10Q9P0V9 454 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 SUCLA2Q9P2R7 463 aaPredicted RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 HESX1Q9UBX0 185 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 PCSK1NQ9UHG2 260 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 TTC7AQ9ULT0 858 aaPredicted RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 HPCAL4Q9UM19 191 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 SATB2Q9UPW6 733 aa4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 R3HDM2Q9Y2K5 976 aaKnown RBP4.75□□□□□ -1.65
PIKFYVE-209ENST00000477200 NUP160Q12769 1436 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ARHGEF11O15085 1522 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 EFCAB6Q5THR3 1501 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 HTR3EA5X5Y0 456 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 PABPN1LA6NDY0 278 aaKnown RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 TRIM64CA6NLI5 447 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 TTC34A8MYJ7 566 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 WDHD1O75717 1129 aaPredicted RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 SUN1O94901 812 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 GSPT1P15170 499 aaKnown RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 BPIP17213 487 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 PPP2R1AP30153 589 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 CA8P35219 290 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 MATR3P43243 847 aaKnown RBP eCLIP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ID4P47928 161 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 CTAG1AP78358 180 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 KRT85P78386 507 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ATP8B2P98198 1209 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ZBTB17Q13105 803 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ZNF268Q14587 947 aaPredicted RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 SUPT20HL1Q3ZLR7 823 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ANKRD20A8PQ5CZ79 823 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 SPECC1Q5M775 1068 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 DACT2Q5SW24 774 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 NAA35Q5VZE5 725 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 TBC1D9BQ66K14 1250 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 PPP4R3AQ6IN85 833 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 NEPROQ6NW34 567 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 KLC3Q6P597 504 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 KDM7AQ6ZMT4 941 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 HOOK3Q86VS8 718 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 TTC30AQ86WT1 665 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ADGRG5Q8IZF4 528 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 LSMEM2Q8N112 164 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 CAMKK1Q8N5S9 505 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 RNF10Q8N5U6 811 aaKnown RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 SCAIQ8N9R8 606 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 CCDC148Q8NFR7 591 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 GABPB2Q8TAK5 448 aaPredicted RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 DEPTORQ8TB45 409 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 CCDC110Q8TBZ0 833 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ZNF473Q8WTR7 871 aaKnown RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ABHD8Q96I13 439 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 RNPC3Q96LT9 517 aaKnown RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ZNF570Q96NI8 536 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 SH2D3AQ9BRG2 576 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 NAA15Q9BXJ9 866 aaKnown RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 PLEKHA4Q9H4M7 779 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 CLK4Q9HAZ1 481 aaKnown RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 PARVBQ9HBI1 364 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 PREBQ9HCU5 417 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 RMND1Q9NWS8 449 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 COMMD8Q9NX08 183 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 MTMR4Q9NYA4 1195 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 LARSQ9P2J5 1176 aaKnown RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 PRELID1Q9Y255 219 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 CNPY2Q9Y2B0 182 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 LRP12Q9Y561 859 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 PCDHB2Q9Y5E7 798 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 COMMD3-BMI1R4GMX3 469 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 SUPT6HQ7KZ85 1726 aaKnown RBP4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 MED14O60244 1454 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ADGRL1O94910 1474 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 IFT140Q96RY7 1462 aa4.74□□□□□ -1.65
PIKFYVE-209ENST00000477200 ADGRA2Q96PE1 1338 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 KDM6AO15550 1401 aaPredicted RBP4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 C9orf84Q5VXU9 1444 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 LMTK2Q8IWU2 1503 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 KAT6BQ8WYB5 2073 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 CTAGE15A4D2H0 777 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 CFAP69A5D8W1 941 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 TARM1B6A8C7 271 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 PPEF2O14830 753 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 STX6O43752 255 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 GFPT2O94808 682 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 CD1AP06126 327 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 HNRNPCP07910 306 aaKnown RBP eCLIP4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 CTAGE8P0CG41 777 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 TSPY4P0CV99 314 aa4.73□□□□□ -1.65
PIKFYVE-209ENST00000477200 TSPY10P0CW01 314 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms