RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 SKOR1P84550 965 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 ST3GAL1Q11201 340 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 SFSWAPQ12872 951 aaKnown RBP15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 C6orf132Q5T0Z8 1188 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 CDCP2Q5VXM1 449 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 USP30Q70CQ3 517 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 KANSL1Q7Z3B3 1105 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 P2RY11Q96G91 374 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 CALML4Q96GE6 196 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 SMARCD1Q96GM5 515 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 VCPIP1Q96JH7 1222 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 FAM84AQ96KN4 292 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 DEPDC7Q96QD5 511 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 ACCSQ96QU6 501 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 IKZF4Q9H2S9 585 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 TMEM245Q9H330 911 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 DPEP3Q9H4B8 488 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 BLOC1S4Q9NUP1 217 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 SEL1LQ9UBV2 794 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 SEPT3Q9UH03 358 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 MYH10P35580 1976 aa15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 USP9YO00507 2555 aaPredicted RBP15.23■□□□□ 0.03
CSNK2B-207ENST00000475875 A0A1W2PR77 199 aa15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 KIAA0391O15091 583 aaKnown RBP15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 SUV39H1O43463 412 aa15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 NEK4P51957 841 aa15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 NXPH1P58417 271 aa15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 UBAP2LQ14157 1087 aaKnown RBP15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 DHX8Q14562 1220 aaKnown RBP15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 SLC45A4Q5BKX6 768 aa15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 L1TD1Q5T7N2 865 aaKnown RBP15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 ARL6IP4Q66PJ3 421 aaKnown RBP15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 DYMQ7RTS9 669 aa15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 FAM35AQ86V20 835 aa15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 ZSWIM2Q8NEG5 633 aa15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 LLPHQ9BRT6 129 aaKnown RBP15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 NCKAP1Q9Y2A7 1128 aa15.22■□□□□ 0.03
CSNK2B-207ENST00000475875 VWA3AA6NCI4 1184 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 A8MXQ7 604 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 LZTS3O60299 673 aaPredicted RBP15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 PRPF6O94906 941 aaKnown RBP15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 CYBBP04839 570 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 SFTPCP11686 197 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 PGFP49763 221 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 INHBCP55103 352 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 HMGN5P82970 282 aaKnown RBP15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 ZNF211Q13398 564 aaPredicted RBP15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 SGO2Q562F6 1265 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 ZNF776Q68DI1 518 aaPredicted RBP15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 CCDC81Q6ZN84 652 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 TADA2BQ86TJ2 420 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 ZNF276Q8N554 614 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 EXD3Q8N9H8 876 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 OR5B17Q8NGF7 314 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 RAD54LQ92698 747 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 DCLK3Q9C098 648 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 AASDHPPTQ9NRN7 309 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 PLA2G4CQ9UP65 541 aa15.21■□□□□ 0.03
CSNK2B-207ENST00000475875 TP53BP1Q12888 1972 aaPredicted RBP15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 ANKRD17O75179 2603 aaKnown RBP15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 C10orf142B7Z368 130 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 TLR4O00206 839 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 USP12O75317 370 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 STC2O76061 302 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 KRT10P13645 584 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 UBA7P41226 1012 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 CCR5P51681 352 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 TNNC1P63316 161 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 BNIP3Q12983 259 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 MCM6Q14566 821 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 ARL13BQ3SXY8 428 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 RILPL1Q5EBL4 403 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 TMEM215Q68D42 235 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 PAQR9Q6ZVX9 377 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 WDR49Q8IV35 697 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 GPD1LQ8N335 351 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 WFIKKN2Q8TEU8 576 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 SORCS1Q8WY21 1168 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 GRAMD1AQ96CP6 724 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 TNIP3Q96KP6 325 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 TJP2Q9UDY2 1190 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 SCML2Q9UQR0 700 aa15.2■□□□□ 0.02
CSNK2B-207ENST00000475875 GOLGA8IPA6NC78 632 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 LRRC72A6NJI9 287 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 GOLGA8JA6NMD2 632 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 ENO4A6NNW6 628 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 AP1G2O75843 785 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 STAU1O95793 577 aaKnown RBP15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 DDIT3P35638 169 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 GALCP54803 685 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 KCNA1Q09470 495 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 ALCAMQ13740 583 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 RABEP1Q15276 862 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 FNDC3BQ53EP0 1204 aaKnown RBP15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 TRAPPC11Q7Z392 1133 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 SFR1Q86XK3 245 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 CPXM2Q8N436 756 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 OR2T34Q8NGX1 318 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 SEMA3CQ99985 751 aa15.19■□□□□ 0.02
CSNK2B-207ENST00000475875 CBWD1Q9BRT8 395 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms