RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PRPF18Q99633 342 aaKnown RBP7.33□□□□□ -1.24
SMC5-203ENST00000475540 TMEM79Q9BSE2 394 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 TTLL2Q9BWV7 592 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 TM2D2Q9BX73 214 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 CDCP1Q9H5V8 836 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 FSCN3Q9NQT6 498 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 LRCH1Q9Y2L9 728 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 UBE2J1Q9Y385 318 aaPredicted RBP7.33□□□□□ -1.24
SMC5-203ENST00000475540 PRYO14603 147 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 RRHO14718 337 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 PLAUP00749 431 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 FGBP02675 491 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 ITGA5P08648 1049 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 SETSIPP0DME0 302 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 SLC8A1P32418 973 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 AGTR2P50052 363 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 ID2Q02363 134 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 RABEP1Q15276 862 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 TRIM71Q2Q1W2 868 aaKnown RBP7.32□□□□□ -1.24
SMC5-203ENST00000475540 SLC9C1Q4G0N8 1177 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 SLC22A17Q8WUG5 538 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 CELF1Q92879 486 aaKnown RBP7.32□□□□□ -1.24
SMC5-203ENST00000475540 FAR2Q96K12 515 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 PAAF1Q9BRP4 392 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 SPRTNQ9H040 489 aaPredicted RBP7.32□□□□□ -1.24
SMC5-203ENST00000475540 AGO4Q9HCK5 861 aaKnown RBP7.32□□□□□ -1.24
SMC5-203ENST00000475540 IGSF9Q9P2J2 1179 aa7.32□□□□□ -1.24
SMC5-203ENST00000475540 GOLGA6L3A6NEY3 463 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 M0QZQ0 153 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 FFAR2O15552 330 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 ENO1P06733 434 aaKnown RBP7.31□□□□□ -1.24
SMC5-203ENST00000475540 NPPBP16860 134 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 NDUFS1P28331 727 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 HOXD9P28356 352 aaPredicted RBP7.31□□□□□ -1.24
SMC5-203ENST00000475540 CPA2P48052 419 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 CFHR1Q03591 330 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 MTA1Q13330 715 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 GRM4Q14833 912 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 BRD3Q15059 726 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 GLE1Q53GS7 698 aaKnown RBP7.31□□□□□ -1.24
SMC5-203ENST00000475540 EARS2Q5JPH6 523 aaKnown RBP7.31□□□□□ -1.24
SMC5-203ENST00000475540 PGBD2Q6P3X8 592 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 TOGARAM2Q6ZUX3 1019 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 TFAP2DQ7Z6R9 452 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 NRSN1Q8IZ57 195 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 ZNF527Q8NB42 609 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 C16orf52Q8NHV5 167 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 BCAS4Q8TDM0 211 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 SCARB1Q8WTV0 552 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 ZNF845Q96IR2 970 aaPredicted RBP7.31□□□□□ -1.24
SMC5-203ENST00000475540 ELOVL1Q9BW60 279 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 TRIM2Q9C040 744 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 TMEM184CQ9NVA4 438 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 SLC52A1Q9NWF4 448 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 PCDHB7Q9Y5E2 793 aa7.31□□□□□ -1.24
SMC5-203ENST00000475540 ZNF521Q96K83 1311 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 CCDC194A0A1B0GVG4 234 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 ADAM10O14672 748 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 PCDH17O14917 1159 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 CTSAP10619 480 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 IDUAP35475 653 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 HTR3AP46098 478 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 UBE4AQ14139 1066 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 RINT1Q6NUQ1 792 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 SHC4Q6S5L8 630 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 C16orf89Q6UX73 402 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 DEF8Q6ZN54 512 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 MRPL10Q7Z7H8 261 aaKnown RBP7.3□□□□□ -1.24
SMC5-203ENST00000475540 GATAD2AQ86YP4 633 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 LAS2Q8IYD9 372 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 ASB12Q8WXK4 309 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 COQ8BQ96D53 544 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 ELOVL5Q9NYP7 299 aa7.3□□□□□ -1.24
SMC5-203ENST00000475540 SPATA31A5Q5VU36 1347 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 SPATA31A7Q8IWB4 1347 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 CER1O95813 267 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 RPS6KB1P23443 525 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 SERPINB3P29508 390 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 STAT6P42226 847 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 ZNF84P51523 738 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 SLC12A2P55011 1212 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 GGT6Q6P531 493 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 RBM44Q6ZP01 1051 aaKnown RBP7.29□□□□□ -1.24
SMC5-203ENST00000475540 SRFBP1Q8NEF9 429 aaKnown RBP7.29□□□□□ -1.24
SMC5-203ENST00000475540 NPIPB3Q92617 1050 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 MTMR4Q9NYA4 1195 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 NFU1Q9UMS0 254 aa7.29□□□□□ -1.24
SMC5-203ENST00000475540 GXYLT2A0PJZ3 443 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 DNPH1O43598 174 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 TLR2O60603 784 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 WDR93Q6P2C0 686 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 TRABD2AQ86V40 505 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 ANKRD13BQ86YJ7 626 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 KAT2BQ92831 832 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 TRMT61AQ96FX7 289 aaKnown RBP7.28□□□□□ -1.24
SMC5-203ENST00000475540 FCRL4Q96PJ5 515 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 WDR12Q9GZL7 423 aaKnown RBP7.28□□□□□ -1.24
SMC5-203ENST00000475540 PRDM16Q9HAZ2 1276 aa7.28□□□□□ -1.24
SMC5-203ENST00000475540 MLXIPLQ9NP71 852 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms