RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 TMPRSS4Q9NRS4 437 aa12.06□□□□□ -0.48
FN1-217ENST00000471193 KLHL11Q9NVR0 708 aa12.06□□□□□ -0.48
FN1-217ENST00000471193 GPATCH2LQ9NWQ4 482 aa12.06□□□□□ -0.48
FN1-217ENST00000471193 SMPD4Q9NXE4 827 aa12.06□□□□□ -0.48
FN1-217ENST00000471193 FZD10Q9ULW2 581 aa12.06□□□□□ -0.48
FN1-217ENST00000471193 AP4E1Q9UPM8 1137 aa12.06□□□□□ -0.48
FN1-217ENST00000471193 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.06□□□□□ -0.48
FN1-217ENST00000471193 USP15Q9Y4E8 981 aaPredicted RBP12.06□□□□□ -0.48
FN1-217ENST00000471193 MYO9BQ13459 2157 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 CTAGE9A4FU28 777 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 H3BQ06 376 aaPredicted RBP12.05□□□□□ -0.48
FN1-217ENST00000471193 GREM1O60565 184 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 MOCS2O96007 188 aaPredicted RBP12.05□□□□□ -0.48
FN1-217ENST00000471193 KRT1P04264 644 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 IRF1P10914 325 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 KCNA5P22460 613 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 CASQ1P31415 396 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 ADRA1BP35368 520 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 DNA2P51530 1060 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 KCNQ1P51787 676 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 RWDD2BP57060 319 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 MTA1Q13330 715 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
FN1-217ENST00000471193 DPYSL2Q16555 572 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 CA9Q16790 459 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 ATP13A4Q4VNC1 1196 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 EFHC2Q5JST6 749 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 ERMARDQ5T6L9 678 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 DCAF12L1Q5VU92 463 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 PAPD7Q5XG87 772 aaKnown RBP12.05□□□□□ -0.48
FN1-217ENST00000471193 DDX42Q86XP3 938 aaKnown RBP eCLIP12.05□□□□□ -0.48
FN1-217ENST00000471193 UNC45BQ8IWX7 931 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 ATP6V0D2Q8N8Y2 350 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 ZSCAN18Q8TBC5 510 aaPredicted RBP12.05□□□□□ -0.48
FN1-217ENST00000471193 FAM71BQ8TC56 605 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 HSPH1Q92598 858 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 USP13Q92995 863 aaPredicted RBP12.05□□□□□ -0.48
FN1-217ENST00000471193 WBP2Q969T9 261 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 BTN2A3PQ96KV6 586 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 SMG9Q9H0W8 520 aaKnown RBP12.05□□□□□ -0.48
FN1-217ENST00000471193 POMKQ9H5K3 350 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 KIF9Q9HAQ2 790 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 GKN1Q9NS71 199 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.05□□□□□ -0.48
FN1-217ENST00000471193 DDX56Q9NY93 547 aaKnown RBP12.05□□□□□ -0.48
FN1-217ENST00000471193 GDE1Q9NZC3 331 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 XPO7Q9UIA9 1087 aaKnown RBP12.05□□□□□ -0.48
FN1-217ENST00000471193 CDH7Q9ULB5 785 aa12.05□□□□□ -0.48
FN1-217ENST00000471193 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 LEFTY2O00292 366 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 PAGE1O75459 146 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 LATS1O95835 1130 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 CORO1AP31146 461 aaKnown RBP12.04□□□□□ -0.48
FN1-217ENST00000471193 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
FN1-217ENST00000471193 ARSEP51690 589 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 AMPD2Q01433 879 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 SEMA3BQ13214 749 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 CBX2Q14781 532 aaPredicted RBP12.04□□□□□ -0.48
FN1-217ENST00000471193 SKIV2LQ15477 1246 aaKnown RBP12.04□□□□□ -0.48
FN1-217ENST00000471193 ZNF77Q15935 545 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 PIK3R6Q5UE93 754 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 Q6ZNB5 142 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 EXD1Q8NHP7 514 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 RIN3Q8TB24 985 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 SH3RF2Q8TEC5 729 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 AZIN2Q96A70 460 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 ASB16Q96NS5 453 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 HAPLN3Q96S86 360 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 MYADMQ96S97 322 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 KCTD15Q96SI1 283 aaPredicted RBP12.04□□□□□ -0.48
FN1-217ENST00000471193 DCLK3Q9C098 648 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 OSBPL2Q9H1P3 480 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 CARD9Q9H257 536 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 DHX35Q9H5Z1 703 aaKnown RBP12.04□□□□□ -0.48
FN1-217ENST00000471193 PCDH18Q9HCL0 1135 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 TDP1Q9NUW8 608 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 CFAP97Q9P2B7 532 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 LSM7Q9UK45 103 aaKnown RBP12.04□□□□□ -0.48
FN1-217ENST00000471193 SNX12Q9UMY4 172 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 CCL26Q9Y258 94 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 DOCK6Q96HP0 2047 aa12.04□□□□□ -0.48
FN1-217ENST00000471193 SPTBN5Q9NRC6 3674 aaKnown RBP12.03□□□□□ -0.48
FN1-217ENST00000471193 LRRD1A4D1F6 860 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 C3orf70A6NLC5 250 aaPredicted RBP12.03□□□□□ -0.48
FN1-217ENST00000471193 KCNK3O14649 394 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 MBTPS2O43462 519 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 ACSL4O60488 711 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 KLKB1P03952 638 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 FCARP24071 287 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 L1CAMP32004 1257 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 CDH6P55285 790 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 NRG1Q02297 640 aaPredicted RBP12.03□□□□□ -0.48
FN1-217ENST00000471193 PDK2Q15119 407 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 MS4A13Q5J8X5 152 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 FAM78AQ5JUQ0 283 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 ACBD5Q5T8D3 534 aaPredicted RBP12.03□□□□□ -0.48
FN1-217ENST00000471193 MANEALQ5VSG8 457 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 NADSYN1Q6IA69 706 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 VSIG1Q86XK7 387 aa12.03□□□□□ -0.48
FN1-217ENST00000471193 ARID3BQ8IVW6 561 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms