RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 APOPT1Q96IL0 206 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 CSPG4P5Q96PW8 444 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 GCATO75600 419 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 TOMM70O94826 608 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 GNAT1P11488 350 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 SKIP12755 728 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 SP100P23497 879 aaPredicted RBP20.78■□□□□ 0.92
CDHR3-207ENST00000470188 SOX4Q06945 474 aaPredicted RBP20.78■□□□□ 0.92
CDHR3-207ENST00000470188 XKR4Q5GH76 650 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 CTAGE3PQ8IX95 158 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 ADGRF2Q8IZF7 708 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 GALNT15Q8N3T1 639 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 ZNF276Q8N554 614 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 PPM1NQ8N819 430 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 NMRK1Q9NWW6 199 aa20.78■□□□□ 0.92
CDHR3-207ENST00000470188 SCN4AP35499 1836 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 EIF4E1BA6NMX2 242 aaKnown RBP20.77■□□□□ 0.92
CDHR3-207ENST00000470188 TREHO43280 583 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 HUS1O60921 280 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 METTL18O95568 372 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 C1QAP02745 245 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 GSTA2P09210 222 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 PSEN2P49810 448 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 ADAM17P78536 824 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 CCDC6Q16204 474 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 CTC1Q2NKJ3 1217 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 EFHC1Q5JVL4 640 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 UBXN11Q5T124 520 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 SPRYD7Q5W111 196 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 OLFML2BQ68BL8 750 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 KCNT2Q6UVM3 1135 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 STRADAQ7RTN6 431 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 LRRC39Q96DD0 335 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 TNIP3Q96KP6 325 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 QKIQ96PU8 341 aaKnown RBP eCLIP20.77■□□□□ 0.923e-11■■■■■ 45.8
CDHR3-207ENST00000470188 TSPAN18Q96SJ8 248 aa20.77■□□□□ 0.92
CDHR3-207ENST00000470188 PYGBP11216 843 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 TKTP29401 623 aaKnown RBP20.76■□□□□ 0.91
CDHR3-207ENST00000470188 TUBP50607 506 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 NEK3P51956 506 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 SLC18A2Q05940 514 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 TTC39BQ5VTQ0 682 aaPredicted RBP20.76■□□□□ 0.91
CDHR3-207ENST00000470188 LRRC6Q86X45 466 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 EGFL6Q8IUX8 553 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 CCDC33Q8N5R6 958 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 BTBD10Q9BSF8 475 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 MANSC1Q9H8J5 431 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.76■□□□□ 0.91
CDHR3-207ENST00000470188 GTF2IRD1Q9UHL9 959 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 SCOCQ9UIL1 159 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 TRDMT1O14717 391 aaKnown RBP20.76■□□□□ 0.91
CDHR3-207ENST00000470188 MATKP42679 507 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 RAB27AP51159 221 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 KHDC1Q4VXA5 237 aaKnown RBP20.76■□□□□ 0.91
CDHR3-207ENST00000470188 NCBP2-AS2Q69YL0 99 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 SH2D5Q6ZV89 423 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 LIMS2Q7Z4I7 341 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 MTDHQ86UE4 582 aaKnown RBP20.76■□□□□ 0.91
CDHR3-207ENST00000470188 TRAPPC9Q96Q05 1148 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 NPHS2Q9NP85 383 aa20.76■□□□□ 0.91
CDHR3-207ENST00000470188 XPO1O14980 1071 aaKnown RBP20.75■□□□□ 0.91
CDHR3-207ENST00000470188 FAM155BO75949 473 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 TPSB2P20231 275 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 PRKCHP24723 683 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 FKBP1BP68106 108 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 TPSAB1Q15661 275 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 HEATR6Q6AI08 1181 aaKnown RBP20.75■□□□□ 0.91
CDHR3-207ENST00000470188 B3GALNT2Q8NCR0 500 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 FAM149B1Q96BN6 582 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 MIPEPQ99797 713 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 CADM1Q9BY67 442 aaKnown RBP20.75■□□□□ 0.91
CDHR3-207ENST00000470188 PLAC1Q9HBJ0 212 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 DTLQ9NZJ0 730 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 ZNF180Q9UJW8 692 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 IPPQ9Y573 584 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 PDCD11Q14690 1871 aaKnown RBP20.75■□□□□ 0.91
CDHR3-207ENST00000470188 CXorf49A8MYA2 514 aaPredicted RBP20.75■□□□□ 0.91
CDHR3-207ENST00000470188 KRT37O76014 449 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 APOEP02649 317 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 DHRS4L1P0CG22 281 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 GOT1P17174 413 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 AMPD1P23109 780 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 ARL4AP40617 200 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 MAGEA3P43357 314 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 SULT1E1P49888 294 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 LILRA4P59901 499 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 SNX30Q5VWJ9 437 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 ZNF534Q76KX8 674 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 PIGZQ86VD9 579 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 FAM131BQ86XD5 332 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 DEFB106AQ8N104 65 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 PYROXD2Q8N2H3 581 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 FAM111AQ96PZ2 611 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 ALG13Q9NP73 1137 aaKnown RBP20.75■□□□□ 0.91
CDHR3-207ENST00000470188 DLGAP2Q9P1A6 1054 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 CPA4Q9UI42 421 aa20.75■□□□□ 0.91
CDHR3-207ENST00000470188 TRIM49D1C9J1S8 452 aa20.74■□□□□ 0.91
CDHR3-207ENST00000470188 HAS3O00219 553 aa20.74■□□□□ 0.91
CDHR3-207ENST00000470188 MYL3P08590 195 aa20.74■□□□□ 0.91
CDHR3-207ENST00000470188 ZNF865P0CJ78 1059 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms