RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 L1CAMP32004 1257 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 GBP1P32455 592 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 HTR7P34969 479 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 CCR2P41597 374 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 CDKN2BP42772 138 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 NRIP1P48552 1158 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ATXN1P54253 815 aaKnown RBP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 DEUP1Q05D60 604 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 PDK2Q15119 407 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 SIX1Q15475 284 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 CLUL1Q15846 466 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 C5orf22Q49AR2 442 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ATP13A4Q4VNC1 1196 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ANKS1BQ7Z6G8 1248 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 TADA2BQ86TJ2 420 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ZNF683Q8IZ20 524 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 RAPGEF5Q92565 580 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 RBM41Q96IZ5 413 aaKnown RBP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 C1orf74Q96LT6 269 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 SNRNP25Q9BV90 132 aaKnown RBP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 CCSER2Q9H7U1 834 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 SFXN1Q9H9B4 322 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ANLNQ9NQW6 1124 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 DDIT4Q9NX09 232 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 MARCH2Q9P0N8 246 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 DNMT3BQ9UBC3 853 aaKnown RBP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 DNMT3LQ9UJW3 386 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 STOML2Q9UJZ1 356 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 NEU3Q9UQ49 428 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 MTCH2Q9Y6C9 303 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 TRIOBPQ9H2D6 2365 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 KCNK3O14649 394 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 KDELR1P24390 212 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 CCR1P32246 355 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ATP5C1P36542 298 aaKnown RBP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ADGRE1Q14246 886 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 CYP1B1Q16678 543 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 CA9Q16790 459 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 TCEAL5Q5H9L2 206 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 SYCE2Q6PIF2 218 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 MFSD7Q6UXD7 560 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 GPR149Q86SP6 731 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 FAM131BQ86XD5 332 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 FAM217AQ8IXS0 508 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ZDHHC14Q8IZN3 488 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ELMOD1Q8N336 334 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 CCDC185Q8N715 623 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 SHKBP1Q8TBC3 707 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ADAMTS19Q8TE59 1207 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 RNF139Q8WU17 664 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 PRMT1Q99873 361 aaKnown RBP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ZNF670Q9BS34 389 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 HERPUD2Q9BSE4 406 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 RNF38Q9H0F5 515 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 RETREG1Q9H6L5 497 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 PCDH18Q9HCL0 1135 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 ASAH2Q9NR71 780 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.47□□□□□ -1.05
NPHP3-204ENST00000469232 USTQ9Y2C2 406 aa8.47□□□□□ -1.05
NPHP3-204ENST00000469232 IGLV3-10A0A075B6K4 115 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 hCG_1818297A0A087WSY0 165 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 SOX1O00570 391 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF185O15231 689 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 CCL16O15467 120 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 SRGAP2O75044 1071 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 URI1O94763 535 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-204ENST00000469232 TBX18O95935 607 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 RHOP08100 348 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 GABRR2P28476 465 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 MLLT6P55198 1093 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-204ENST00000469232 COG7P83436 770 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 DPYSL3Q14195 570 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 GRIN2CQ14957 1233 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 CDO1Q16878 200 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 RNF43Q68DV7 783 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 SLC9A4Q6AI14 798 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 ANKRD54Q6NXT1 300 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 SPOCD1Q6ZMY3 1216 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 Q6ZNB5 142 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 BBS12Q6ZW61 710 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 SLC13A5Q86YT5 568 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-204ENST00000469232 PLD4Q96BZ4 506 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 KCTD15Q96SI1 283 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-204ENST00000469232 S1PR5Q9H228 398 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 TASP1Q9H6P5 420 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 WDCPQ9H6R7 721 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 FAM204AQ9H8W3 233 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 CLEC1BQ9P126 229 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 PCSK1NQ9UHG2 260 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 ARHGAP26Q9UNA1 814 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 MAGED2Q9UNF1 606 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-204ENST00000469232 AP4E1Q9UPM8 1137 aa8.46□□□□□ -1.06
NPHP3-204ENST00000469232 DOCK6Q96HP0 2047 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 CCDC195A0A1B0GUA6 201 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 C2orf78A6NCI8 922 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 WASH4PA8MWX3 477 aa8.45□□□□□ -1.06
NPHP3-204ENST00000469232 PGRMC1O00264 195 aaKnown RBP8.45□□□□□ -1.06
NPHP3-204ENST00000469232 ZNF197O14709 1029 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms