RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CLIC5Q9NZA1 410 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 SLC4A7Q9Y6M7 1214 aa19.64■□□□□ 0.73
SMC4-209ENST00000468653 FAM72CH0Y354 149 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 MAP3K6O95382 1288 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 SEC24AO95486 1093 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 RARGP13631 454 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 ZNF135P52742 658 aaPredicted RBP19.63■□□□□ 0.73
SMC4-209ENST00000468653 GDF10P55107 478 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 GBE1Q04446 702 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 FAM72AQ5TYM5 149 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 FAM72DQ6L9T8 149 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 B4GALNT4Q76KP1 1039 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 TMC3Q7Z5M5 1100 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 FAM72BQ86X60 149 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 EPAS1Q99814 870 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 OLA1Q9NTK5 396 aaKnown RBP19.63■□□□□ 0.73
SMC4-209ENST00000468653 ETNK2Q9NVF9 386 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 ARHGEF38Q9NXL2 777 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 HSFX1Q9UBD0 423 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 OR12D3Q9UGF7 316 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 MKI67P46013 3256 aaKnown RBP19.63■□□□□ 0.73
SMC4-209ENST00000468653 ALPK3Q96L96 1907 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 PLXNA3P51805 1871 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 PTPRSQ13332 1948 aa19.63■□□□□ 0.73
SMC4-209ENST00000468653 SPDYE4A6NLX3 237 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 CA8P35219 290 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 HCAR3P49019 387 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 SEMA3BQ13214 749 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 RAB33AQ14088 237 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 DPYSQ14117 519 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 CFAP58Q5T655 872 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 BZW1Q7L1Q6 419 aaKnown RBP19.62■□□□□ 0.73
SMC4-209ENST00000468653 HERC6Q8IVU3 1022 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 HERVK_113Q902F9 699 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 ZBTB9Q96C00 473 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 RAD9AQ99638 391 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 FAM53CQ9NYF3 392 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 MFHAS1Q9Y4C4 1052 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 CFAP69A5D8W1 941 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 GOLGA6BA6NDN3 693 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 ELF1P32519 619 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 ALDH1A3P47895 512 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 FAM193AP78312 1265 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 EFEMP1Q12805 493 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 SLC10A2Q12908 348 aaPredicted RBP19.62■□□□□ 0.73
SMC4-209ENST00000468653 XRCC4Q13426 336 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 PPP2R5DQ14738 602 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 RASIP1Q5U651 963 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 ALS2CLQ60I27 953 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 CDKL3Q8IVW4 592 aaPredicted RBP19.62■□□□□ 0.73
SMC4-209ENST00000468653 KRT222Q8N1A0 295 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 HAPLN3Q96S86 360 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 TTLL2Q9BWV7 592 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 OSBPL2Q9H1P3 480 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.62■□□□□ 0.73
SMC4-209ENST00000468653 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.62■□□□□ 0.73
SMC4-209ENST00000468653 TLR6Q9Y2C9 796 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 ATP8A1Q9Y2Q0 1164 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 SNX10Q9Y5X0 201 aa19.62■□□□□ 0.73
SMC4-209ENST00000468653 BCLAF3A2AJT9 711 aaKnown RBP19.61■□□□□ 0.73
SMC4-209ENST00000468653 DNALI1O14645 258 aaPredicted RBP19.61■□□□□ 0.73
SMC4-209ENST00000468653 NDC80O14777 642 aa19.61■□□□□ 0.73
SMC4-209ENST00000468653 KCNN4O15554 427 aa19.61■□□□□ 0.73
SMC4-209ENST00000468653 PPFIA2O75334 1257 aa19.61■□□□□ 0.73
SMC4-209ENST00000468653 ATP2A2P16615 1042 aaKnown RBP19.61■□□□□ 0.73
SMC4-209ENST00000468653 CREMQ03060 361 aa19.61■□□□□ 0.73
SMC4-209ENST00000468653 C10orf120Q5SQS8 335 aa19.61■□□□□ 0.73
SMC4-209ENST00000468653 GPR65Q8IYL9 337 aa19.61■□□□□ 0.73
SMC4-209ENST00000468653 UBLCP1Q8WVY7 318 aaPredicted RBP19.61■□□□□ 0.73
SMC4-209ENST00000468653 CLP1Q92989 425 aaKnown RBP19.61■□□□□ 0.73
SMC4-209ENST00000468653 SIK2Q9H0K1 926 aa19.61■□□□□ 0.73
SMC4-209ENST00000468653 DTLQ9NZJ0 730 aa19.61■□□□□ 0.73
SMC4-209ENST00000468653 TPX2Q9ULW0 747 aaKnown RBP19.61■□□□□ 0.73
SMC4-209ENST00000468653 SSX2IPQ9Y2D8 614 aa19.61■□□□□ 0.73
SMC4-209ENST00000468653 PRRG1O14668 218 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 TP73O15350 636 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 TLL1O43897 1013 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 CSH1P0DML2 217 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 CSH2P0DML3 217 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 SLC2A3P11169 496 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 ERCC2P18074 760 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 RBL1P28749 1068 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 RPL22P35268 128 aaKnown RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 ACTN2P35609 894 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 HSD17B3P37058 310 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 TBX4P57082 545 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 TAF12Q16514 161 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 SLC45A4Q5BKX6 768 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 RHBDF2Q6PJF5 856 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 PDZD4Q76G19 769 aaPredicted RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 CCDC25Q86WR0 208 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 KLHL23Q8NBE8 558 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 PHOSPHO2Q8TCD6 241 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 RUFY1Q96T51 708 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 HTATIP2Q9BUP3 242 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 UBE2OQ9C0C9 1292 aaKnown RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 TSPYL1Q9H0U9 437 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 FNIP2Q9P278 1114 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 ZMYND8Q9ULU4 1186 aaPredicted RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 YIPF1Q9Y548 306 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms