RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 STAP2Q9UGK3 403 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 RIMKLBQ9ULI2 386 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 ANKRD6Q9Y2G4 727 aa4.41□□□□□ -1.7
XRN1-206ENST00000467077 MAGI1Q96QZ7 1491 aaPredicted RBP4.41□□□□□ -1.7
XRN1-206ENST00000467077 OR6C75A6NL08 312 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 TMEM233B4DJY2 109 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 CA12O43570 354 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 SLC3A2P08195 630 aaKnown RBP4.4□□□□□ -1.71
XRN1-206ENST00000467077 NCLP19338 710 aaKnown RBP4.4□□□□□ -1.71
XRN1-206ENST00000467077 MCL1Q07820 350 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 FGL2Q14314 439 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 TTF1Q15361 905 aaPredicted RBP4.4□□□□□ -1.71
XRN1-206ENST00000467077 ZNF672Q499Z4 452 aaPredicted RBP4.4□□□□□ -1.71
XRN1-206ENST00000467077 C9orf57Q5W0N0 161 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 CHPFQ8IZ52 775 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 C11orf44Q8N8P7 122 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 DBF4BQ8NFT6 615 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 EME1Q96AY2 570 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 WDR83Q9BRX9 315 aaKnown RBP4.4□□□□□ -1.71
XRN1-206ENST00000467077 SPRY4Q9C004 299 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 AAMDCQ9H7C9 122 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 TCF7L2Q9NQB0 619 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 XPNPEP3Q9NQH7 507 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 TSPOAP1O95153 1857 aa4.4□□□□□ -1.71
XRN1-206ENST00000467077 SYNJ2O15056 1496 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 LOC102723971A0A1B0GUV8 181 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 PLSCR5A0PG75 271 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 CCP110O43303 1012 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 PIAS2O75928 621 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 PRSS2P07478 247 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 KLRC1P26715 233 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 IDUAP35475 653 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 ITGA8P53708 1063 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 RAB1AP62820 205 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 PIN1Q13526 163 aaPredicted RBP4.39□□□□□ -1.71
XRN1-206ENST00000467077 ATAT1Q5SQI0 421 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 CREB3L2Q70SY1 520 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 METTL25Q8N6Q8 603 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 PRR26Q8N8Z3 221 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 C7orf57Q8NEG2 295 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 HPS3Q969F9 1004 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 SPSB4Q96A44 273 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 ZNF668Q96K58 619 aaPredicted RBP4.39□□□□□ -1.71
XRN1-206ENST00000467077 MAP3K14Q99558 947 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 SENP7Q9BQF6 1050 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 TTLL2Q9BWV7 592 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 RHOBTB2Q9BYZ6 727 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 ERCC6L2Q5T890 1561 aa4.39□□□□□ -1.71
XRN1-206ENST00000467077 GRIN2BQ13224 1484 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 FGD5Q6ZNL6 1462 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 E2F8A0AVK6 867 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 DPPA5A6NC42 116 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 PARP1P09874 1014 aaKnown RBP4.38□□□□□ -1.71
XRN1-206ENST00000467077 CT47B1P0C2W7 299 aaPredicted RBP4.38□□□□□ -1.71
XRN1-206ENST00000467077 TMIGD3P0DMS9 266 aaPredicted RBP4.38□□□□□ -1.71
XRN1-206ENST00000467077 CLCN5P51795 746 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 KRTAP10-3P60369 221 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 KIAA1755Q5JYT7 1200 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 IFIT1BQ5T764 474 aaKnown RBP4.38□□□□□ -1.71
XRN1-206ENST00000467077 ISM2Q6H9L7 571 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 FAM83HQ6ZRV2 1179 aaPredicted RBP4.38□□□□□ -1.71
XRN1-206ENST00000467077 KCTD20Q7Z5Y7 419 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 GRAMD1CQ8IYS0 662 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 SMCR8Q8TEV9 937 aaPredicted RBP4.38□□□□□ -1.71
XRN1-206ENST00000467077 RNF26Q9BY78 433 aaPredicted RBP4.38□□□□□ -1.71
XRN1-206ENST00000467077 ZCWPW1Q9H0M4 648 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 SLC12A5Q9H2X9 1139 aa4.38□□□□□ -1.71
XRN1-206ENST00000467077 SIRT3Q9NTG7 399 aaPredicted RBP4.38□□□□□ -1.71
XRN1-206ENST00000467077 PNMA8BQ9ULN7 279 aaPredicted RBP4.38□□□□□ -1.71
XRN1-206ENST00000467077 C16orf96A6NNT2 1141 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 TTC34A8MYJ7 566 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 MDM4O15151 490 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 RRP9O43818 475 aaKnown RBP4.37□□□□□ -1.71
XRN1-206ENST00000467077 SNX2O60749 519 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 OFD1O75665 1012 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 IFNA2P01563 188 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 SP1P08047 785 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 PTDSS1P48651 473 aaKnown RBP4.37□□□□□ -1.71
XRN1-206ENST00000467077 RAB27AP51159 221 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 ARFIP2P53365 341 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 STK3Q13188 491 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 ZNF267Q14586 743 aaPredicted RBP4.37□□□□□ -1.71
XRN1-206ENST00000467077 TTLL5Q6EMB2 1281 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 PARM1Q6UWI2 310 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 C16orf82Q7Z2V1 217 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 TAF15Q92804 592 aaKnown RBP eCLIP4.37□□□□□ -1.71
XRN1-206ENST00000467077 INPP5DQ92835 1189 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 C1GALT1C1Q96EU7 318 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 CGRRF1Q99675 332 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 RTFDC1Q9BY42 306 aaPredicted RBP4.37□□□□□ -1.71
XRN1-206ENST00000467077 KRCC1Q9NPI7 259 aaPredicted RBP4.37□□□□□ -1.71
XRN1-206ENST00000467077 VPS45Q9NRW7 570 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 ASNSD1Q9NWL6 643 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 ZNF180Q9UJW8 692 aa4.37□□□□□ -1.71
XRN1-206ENST00000467077 G3BP2Q9UN86 482 aaKnown RBP4.37□□□□□ -1.71
XRN1-206ENST00000467077 MAGED2Q9UNF1 606 aaPredicted RBP4.37□□□□□ -1.71
XRN1-206ENST00000467077 KDM6BO15054 1643 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 A0A1W2PPL8 197 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 PRR23AA6NEV1 266 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 H7C4K7 107 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms