RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 ERVK-5Q9HDB9 667 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 ABHD10Q9NUJ1 306 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 CPNE7Q9UBL6 633 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 DKK4Q9UBT3 224 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 RGS17Q9UGC6 210 aaPredicted RBP2.63□□□□□ -1.99
CCDC93-205ENST00000466171 TCEAL9Q9UHQ7 104 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 ERRFI1Q9UJM3 462 aaPredicted RBP2.63□□□□□ -1.99
CCDC93-205ENST00000466171 OGDHLQ9ULD0 1010 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 VPS4AQ9UN37 437 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 HPSEQ9Y251 543 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 USP19O94966 1318 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 SPATA31A5Q5VU36 1347 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 EMSYQ7Z589 1322 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 SPATA31A7Q8IWB4 1347 aa2.63□□□□□ -1.99
CCDC93-205ENST00000466171 COL15A1P39059 1388 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 A0A0G2JK05 382 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 C16orf96A6NNT2 1141 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 PRPF3O43395 683 aaKnown RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 FRS3O43559 492 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 ATG13O75143 517 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 MBPP02686 304 aaPredicted RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 ENO1P06733 434 aaKnown RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 ACAA1P09110 424 aaPredicted RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 AKR1A1P14550 325 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 BTF3P20290 206 aaKnown RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 CIITAP33076 1130 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 HOXD12P35452 270 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 IDUAP35475 653 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 RPS16P62249 146 aaKnown RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 KCNAB1Q14722 419 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 CNGA2Q16280 664 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 IZUMO4Q1ZYL8 232 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 SLC4A8Q2Y0W8 1093 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 C3orf38Q5JPI3 329 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 PIK3CD-AS1Q5SR53 167 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 OTUD3Q5T2D3 398 aaPredicted RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 MANEALQ5VSG8 457 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 LIPMQ5VYY2 423 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 NUGGCQ68CJ6 796 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 GRHL2Q6ISB3 625 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 SRGAP1Q7Z6B7 1085 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 WDR75Q8IWA0 830 aaKnown RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 FAM47BQ8NA70 645 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 MBD3L2Q8NHZ7 208 aaPredicted RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 TMEM174Q8WUU8 243 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 MSI2Q96DH6 328 aaKnown RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 TAAR9Q96RI9 348 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 WDR83Q9BRX9 315 aaKnown RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 C22orf23Q9BZE7 217 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 CDT1Q9H211 546 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 CHST8Q9H2A9 424 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 C6orf106Q9H6K1 298 aaPredicted RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 PLSCR4Q9NRQ2 329 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 STK32BQ9NY57 414 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 CHPF2Q9P2E5 772 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 VPS51Q9UID3 782 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 ZNF180Q9UJW8 692 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 SLC8A2Q9UPR5 921 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 THRAP3Q9Y2W1 955 aaKnown RBP2.62□□□□□ -1.99
CCDC93-205ENST00000466171 EID1Q9Y6B2 187 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 EVPLQ92817 2033 aa2.62□□□□□ -1.99
CCDC93-205ENST00000466171 KRTAP9-6A8MVA2 160 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 LDB3O75112 727 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 ZNF432O94892 652 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 SGPL1O95470 568 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 IFNA2P01563 188 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 U2AF1L5P0DN76 240 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 CHRNB1P11230 501 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 MMP8P22894 467 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 NDUFS1P28331 727 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 HOXA11P31270 313 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 IGHMBP2P38935 993 aaKnown RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 RFX2P48378 723 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 SOX2P48431 317 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 CARSP49589 748 aaKnown RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 RAB27AP51159 221 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 CACNB3P54284 484 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 DSCR9P59020 149 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 HILS1P60008 231 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 U2AF1Q01081 240 aaKnown RBP eCLIP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 ROR2Q01974 943 aaKnown RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 PIN1Q13526 163 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 KCNJ12Q14500 433 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 ACOX1Q15067 660 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 CNN3Q15417 329 aaKnown RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 ANXA2RQ3ZCQ2 193 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 SWSAP1Q6NVH7 229 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 FBXL22Q6P050 247 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 DHRS13Q6UX07 377 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 LRIG3Q6UXM1 1119 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 TSR2Q969E8 191 aaKnown RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 GJA10Q969M2 543 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 PHF21BQ96EK2 531 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 PRR11Q96HE9 360 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 ZNF845Q96IR2 970 aaPredicted RBP2.61□□□□□ -1.99
CCDC93-205ENST00000466171 CLMNQ96JQ2 1002 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 FAM227BQ96M60 508 aa2.61□□□□□ -1.99
CCDC93-205ENST00000466171 ELOVL1Q9BW60 279 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms