RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 RALGPS2Q86X27 583 aaPredicted RBP9.92□□□□□ -0.82
ATG3-203ENST00000465980 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 OR6B3Q8NGW1 331 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 KAT5Q92993 513 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 MSANTD3Q96H12 275 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 FUBP3Q96I24 572 aaKnown RBP eCLIP9.92□□□□□ -0.82
ATG3-203ENST00000465980 CYP2S1Q96SQ9 504 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 NIF3L1Q9GZT8 377 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 DPEP3Q9H4B8 488 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 SMYD3Q9H7B4 428 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 NHEJ1Q9H9Q4 299 aaPredicted RBP9.92□□□□□ -0.82
ATG3-203ENST00000465980 HPS4Q9NQG7 708 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.92□□□□□ -0.82
ATG3-203ENST00000465980 KCND1Q9NSA2 647 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 C2orf42Q9NWW7 574 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 NME7Q9Y5B8 376 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 EPN1Q9Y6I3 576 aaPredicted RBP9.92□□□□□ -0.82
ATG3-203ENST00000465980 NUP205Q92621 2012 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 THADAQ6YHU6 1953 aa9.92□□□□□ -0.82
ATG3-203ENST00000465980 CHD8Q9HCK8 2581 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 TRAV19A0A0A6YYK7 116 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 C2orf78A6NCI8 922 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 OTOL1A6NHN0 477 aaPredicted RBP9.91□□□□□ -0.82
ATG3-203ENST00000465980 A8MXQ7 604 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 CHURC1-FNTBB4DL54 471 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 F8VP50 259 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 CLDN5O00501 218 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 GFPT2O94808 682 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 TDGF1P13385 188 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 DDX6P26196 483 aaKnown RBP eCLIP9.91□□□□□ -0.82
ATG3-203ENST00000465980 ANXA13P27216 316 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 WEE1P30291 646 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 CYLC1P35663 651 aaPredicted RBP9.91□□□□□ -0.82
ATG3-203ENST00000465980 GNL1P36915 607 aaPredicted RBP9.91□□□□□ -0.82
ATG3-203ENST00000465980 ID4P47928 161 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 FNTBP49356 437 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 CACNA2D1P54289 1103 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 KLHL30Q0D2K2 578 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 IFRD2Q12894 506 aaPredicted RBP9.91□□□□□ -0.82
ATG3-203ENST00000465980 PPP2R5DQ14738 602 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 MTF1Q14872 753 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 MAPRE1Q15691 268 aaKnown RBP9.91□□□□□ -0.82
ATG3-203ENST00000465980 ASTE1Q2TB18 679 aaPredicted RBP9.91□□□□□ -0.82
ATG3-203ENST00000465980 OXLD1Q5BKU9 147 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 ZNF667Q5HYK9 610 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 DPH6Q7L8W6 267 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 FAM71AQ8IYT1 594 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 SPEM1Q8N4L4 309 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 UBR7Q8N806 425 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 ARL14EPQ8N8R7 260 aaPredicted RBP9.91□□□□□ -0.82
ATG3-203ENST00000465980 ZBTB44Q8NCP5 570 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 MYCBPAPQ8TBZ2 947 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 TRMT2BQ96GJ1 504 aaKnown RBP9.91□□□□□ -0.82
ATG3-203ENST00000465980 PCED1BQ96HM7 432 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 CCDC42Q96M95 316 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 ZCCHC2Q9C0B9 1178 aaKnown RBP9.91□□□□□ -0.82
ATG3-203ENST00000465980 ZNF518BQ9C0D4 1074 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 SUV39H2Q9H5I1 410 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 KIF9Q9HAQ2 790 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 TMEM30AQ9NV96 361 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 ZMYM5Q9UJ78 669 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 CNTN6Q9UQ52 1028 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 WNT6Q9Y6F9 365 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 PI4KAP42356 2102 aa9.91□□□□□ -0.82
ATG3-203ENST00000465980 EIF3CLB5ME19 914 aaKnown RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 SCAMP3O14828 347 aaKnown RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 LILRB5O75023 590 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 NDUFA10O95299 355 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 LCA5LO95447 670 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 ABL1P00519 1130 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 PLEKP08567 350 aaPredicted RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 USP17L7P0C7H9 530 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 PNMA6AP0CW24 399 aaPredicted RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 PTPN1P18031 435 aaKnown RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 ACO1P21399 889 aaKnown RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 EIF4A3P38919 411 aaKnown RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 IFNAR2P48551 515 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 GDF10P55107 478 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 MLLT6P55198 1093 aaPredicted RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 CDH8P55286 799 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 ARID5AQ03989 594 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 SRSF5Q13243 272 aaKnown RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 ORC1Q13415 861 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 RUNX3Q13761 415 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 CCINQ13939 588 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 ZNF77Q15935 545 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 MAP7D1Q3KQU3 841 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 TDRD12Q587J7 1177 aaKnown RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 DGKKQ5KSL6 1271 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 PKN3Q6P5Z2 889 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 C1orf228Q6PIY5 440 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 VSTM1Q6UX27 236 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 PRR23BQ6ZRT6 265 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 TOGARAM2Q6ZUX3 1019 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 B3GALNT2Q8NCR0 500 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 SH3RF2Q8TEC5 729 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 NELL1Q92832 810 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 MYRFLQ96LU7 910 aa9.9□□□□□ -0.82
ATG3-203ENST00000465980 EIF3CQ99613 913 aaKnown RBP9.9□□□□□ -0.82
ATG3-203ENST00000465980 FAM83CQ9BQN1 747 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms